Gene : AL4G36240 A. lyrata v2.1

Defline:  (1 of 2) K16275 - E3 ubiquitin-protein ligase BAH [EC:6.3.2.19] (BAH, NLA) Genomic Order:  2324
Name:  ? AL4G36240 Secondary Identifier:  ? PAC:35925038

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

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Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G36240 0.5kb upstream 0.5kb upstream 3095   true scaffold_4: 18865130-18868224 Arabidopsis lyrata
AL4G36240 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 18867725-18868224 Arabidopsis lyrata
AL4G36240 0.5kb downstream 0.5kb downstream 3095   true scaffold_4: 18864630-18867724 Arabidopsis lyrata
AL4G36240 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 18864630-18865129 Arabidopsis lyrata
AL4G36240 1.0kb upstream 1.0kb upstream 3595   true scaffold_4: 18865130-18868724 Arabidopsis lyrata
AL4G36240 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 18867725-18868724 Arabidopsis lyrata
AL4G36240 1.0kb downstream 1.0kb downstream 3595   true scaffold_4: 18864130-18867724 Arabidopsis lyrata
AL4G36240 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 18864130-18865129 Arabidopsis lyrata
AL4G36240 2.0kb upstream 2.0kb upstream 4595   true scaffold_4: 18865130-18869724 Arabidopsis lyrata
AL4G36240 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 18867725-18869724 Arabidopsis lyrata
AL4G36240 2.0kb downstream 2.0kb downstream 4595   true scaffold_4: 18863130-18867724 Arabidopsis lyrata
AL4G36240 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 18863130-18865129 Arabidopsis lyrata
AL4G36240 5.0kb upstream 5.0kb upstream 7595   true scaffold_4: 18865130-18872724 Arabidopsis lyrata
AL4G36240 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 18867725-18872724 Arabidopsis lyrata
AL4G36240 5.0kb downstream 5.0kb downstream 7595   true scaffold_4: 18860130-18867724 Arabidopsis lyrata
AL4G36240 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 18860130-18865129 Arabidopsis lyrata
AL4G36240 10.0kb upstream 10.0kb upstream 12595   true scaffold_4: 18865130-18877724 Arabidopsis lyrata
AL4G36240 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 18867725-18877724 Arabidopsis lyrata
AL4G36240 10.0kb downstream 10.0kb downstream 12595   true scaffold_4: 18855130-18867724 Arabidopsis lyrata
AL4G36240 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 18855130-18865129 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379567 5261 Brassicaceae View MSA
123831644 5264 Brassicales-Malvales View MSA
124345582 5266 SBM View MSA
124240285 5268 Malvidae View MSA
124061797 5270 Rosid View MSA
123736545 5271 Pentapetalae View MSA
122788039 5272 Eudicot View MSA
122046768 5273 Angiosperm View MSA
121350146 5274 Embryophyte View MSA
123425854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain