Gene : AL4G39190 A. lyrata v2.1

Defline:  (1 of 2) K00284 - glutamate synthase (ferredoxin) (E1.4.7.1) Genomic Order:  2604
Name:  ? AL4G39190 Secondary Identifier:  ? PAC:35924018

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CITRULBIO-PWY Arabidopsis lyrata pathologic  
Alyrata GLUTAMINDEG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3282 Arabidopsis lyrata pathologic  
Alyrata PWY-4341 Arabidopsis lyrata pathologic  
Alyrata PWY-6549 Arabidopsis lyrata pathologic  
Alyrata PWY-6964 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G39190 0.5kb upstream 0.5kb upstream 11692   true scaffold_4: 20076441-20088132 Arabidopsis lyrata
AL4G39190 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 20076441-20076940 Arabidopsis lyrata
AL4G39190 0.5kb downstream 0.5kb downstream 11692   true scaffold_4: 20076941-20088632 Arabidopsis lyrata
AL4G39190 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 20088133-20088632 Arabidopsis lyrata
AL4G39190 1.0kb upstream 1.0kb upstream 12192   true scaffold_4: 20075941-20088132 Arabidopsis lyrata
AL4G39190 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 20075941-20076940 Arabidopsis lyrata
AL4G39190 1.0kb downstream 1.0kb downstream 12192   true scaffold_4: 20076941-20089132 Arabidopsis lyrata
AL4G39190 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 20088133-20089132 Arabidopsis lyrata
AL4G39190 2.0kb upstream 2.0kb upstream 13192   true scaffold_4: 20074941-20088132 Arabidopsis lyrata
AL4G39190 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 20074941-20076940 Arabidopsis lyrata
AL4G39190 2.0kb downstream 2.0kb downstream 13192   true scaffold_4: 20076941-20090132 Arabidopsis lyrata
AL4G39190 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 20088133-20090132 Arabidopsis lyrata
AL4G39190 5.0kb upstream 5.0kb upstream 16192   true scaffold_4: 20071941-20088132 Arabidopsis lyrata
AL4G39190 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 20071941-20076940 Arabidopsis lyrata
AL4G39190 5.0kb downstream 5.0kb downstream 16192   true scaffold_4: 20076941-20093132 Arabidopsis lyrata
AL4G39190 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 20088133-20093132 Arabidopsis lyrata
AL4G39190 10.0kb upstream 10.0kb upstream 21192   true scaffold_4: 20066941-20088132 Arabidopsis lyrata
AL4G39190 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 20066941-20076940 Arabidopsis lyrata
AL4G39190 10.0kb downstream 10.0kb downstream 21192   true scaffold_4: 20076941-20098132 Arabidopsis lyrata
AL4G39190 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 20088133-20098132 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511077 5273 Angiosperm View MSA
122371936 5261 Brassicaceae View MSA
123800262 5264 Brassicales-Malvales View MSA
124297698 5266 SBM View MSA
124149522 5268 Malvidae View MSA
123875316 5270 Rosid View MSA
123459159 5271 Pentapetalae View MSA
122494554 5272 Eudicot View MSA
120784144 5274 Embryophyte View MSA
122826079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain