Gene : AL4G39180 A. lyrata v2.1

Defline:  (1 of 2) PTHR23086:SF37 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4-RELATED Genomic Order:  2603
Name:  ? AL4G39180 Secondary Identifier:  ? PAC:35925053

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G39180 0.5kb upstream 0.5kb upstream 3827   true scaffold_4: 20072291-20076117 Arabidopsis lyrata
AL4G39180 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 20072291-20072790 Arabidopsis lyrata
AL4G39180 0.5kb downstream 0.5kb downstream 3827   true scaffold_4: 20072791-20076617 Arabidopsis lyrata
AL4G39180 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 20076118-20076617 Arabidopsis lyrata
AL4G39180 1.0kb upstream 1.0kb upstream 4327   true scaffold_4: 20071791-20076117 Arabidopsis lyrata
AL4G39180 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 20071791-20072790 Arabidopsis lyrata
AL4G39180 1.0kb downstream 1.0kb downstream 4327   true scaffold_4: 20072791-20077117 Arabidopsis lyrata
AL4G39180 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 20076118-20077117 Arabidopsis lyrata
AL4G39180 2.0kb upstream 2.0kb upstream 5327   true scaffold_4: 20070791-20076117 Arabidopsis lyrata
AL4G39180 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 20070791-20072790 Arabidopsis lyrata
AL4G39180 2.0kb downstream 2.0kb downstream 5327   true scaffold_4: 20072791-20078117 Arabidopsis lyrata
AL4G39180 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 20076118-20078117 Arabidopsis lyrata
AL4G39180 5.0kb upstream 5.0kb upstream 8327   true scaffold_4: 20067791-20076117 Arabidopsis lyrata
AL4G39180 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 20067791-20072790 Arabidopsis lyrata
AL4G39180 5.0kb downstream 5.0kb downstream 8327   true scaffold_4: 20072791-20081117 Arabidopsis lyrata
AL4G39180 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 20076118-20081117 Arabidopsis lyrata
AL4G39180 10.0kb upstream 10.0kb upstream 13327   true scaffold_4: 20062791-20076117 Arabidopsis lyrata
AL4G39180 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 20062791-20072790 Arabidopsis lyrata
AL4G39180 10.0kb downstream 10.0kb downstream 13327   true scaffold_4: 20072791-20086117 Arabidopsis lyrata
AL4G39180 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 20076118-20086117 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371417 5261 Brassicaceae View MSA
123839827 5264 Brassicales-Malvales View MSA
124340545 5266 SBM View MSA
124242521 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain