Gene : AL4G37920 A. lyrata v2.1

Defline:  (1 of 2) K03844 - alpha-1,2-mannosyltransferase (ALG11) Genomic Order:  2481
Name:  ? AL4G37920 Secondary Identifier:  ? PAC:35923722

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G37920 0.5kb upstream 0.5kb upstream 5318   true scaffold_4: 19600050-19605367 Arabidopsis lyrata
AL4G37920 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 19600050-19600549 Arabidopsis lyrata
AL4G37920 0.5kb downstream 0.5kb downstream 5318   true scaffold_4: 19600550-19605867 Arabidopsis lyrata
AL4G37920 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 19605368-19605867 Arabidopsis lyrata
AL4G37920 1.0kb upstream 1.0kb upstream 5818   true scaffold_4: 19599550-19605367 Arabidopsis lyrata
AL4G37920 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 19599550-19600549 Arabidopsis lyrata
AL4G37920 1.0kb downstream 1.0kb downstream 5818   true scaffold_4: 19600550-19606367 Arabidopsis lyrata
AL4G37920 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 19605368-19606367 Arabidopsis lyrata
AL4G37920 2.0kb upstream 2.0kb upstream 6818   true scaffold_4: 19598550-19605367 Arabidopsis lyrata
AL4G37920 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 19598550-19600549 Arabidopsis lyrata
AL4G37920 2.0kb downstream 2.0kb downstream 6818   true scaffold_4: 19600550-19607367 Arabidopsis lyrata
AL4G37920 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 19605368-19607367 Arabidopsis lyrata
AL4G37920 5.0kb upstream 5.0kb upstream 9818   true scaffold_4: 19595550-19605367 Arabidopsis lyrata
AL4G37920 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 19595550-19600549 Arabidopsis lyrata
AL4G37920 5.0kb downstream 5.0kb downstream 9818   true scaffold_4: 19600550-19610367 Arabidopsis lyrata
AL4G37920 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 19605368-19610367 Arabidopsis lyrata
AL4G37920 10.0kb upstream 10.0kb upstream 14818   true scaffold_4: 19590550-19605367 Arabidopsis lyrata
AL4G37920 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 19590550-19600549 Arabidopsis lyrata
AL4G37920 10.0kb downstream 10.0kb downstream 14818   true scaffold_4: 19600550-19615367 Arabidopsis lyrata
AL4G37920 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 19605368-19615367 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327077 5261 Brassicaceae View MSA
123768519 5264 Brassicales-Malvales View MSA
124267103 5266 SBM View MSA
124123440 5268 Malvidae View MSA
123852567 5270 Rosid View MSA
123741917 5271 Pentapetalae View MSA
122794409 5272 Eudicot View MSA
122048989 5273 Angiosperm View MSA
121348193 5274 Embryophyte View MSA
123425539 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain