Gene : AL4G37780 A. lyrata v2.1

Defline:  (1 of 1) PTHR10336:SF101 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 Genomic Order:  2469
Name:  ? AL4G37780 Secondary Identifier:  ? PAC:35925179

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPASYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6367 Arabidopsis lyrata pathologic  
Alyrata PWY-7039 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G37780 0.5kb upstream 0.5kb upstream 3491   true scaffold_4: 19545134-19548624 Arabidopsis lyrata
AL4G37780 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 19545134-19545633 Arabidopsis lyrata
AL4G37780 0.5kb downstream 0.5kb downstream 3491   true scaffold_4: 19545634-19549124 Arabidopsis lyrata
AL4G37780 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 19548625-19549124 Arabidopsis lyrata
AL4G37780 1.0kb upstream 1.0kb upstream 3991   true scaffold_4: 19544634-19548624 Arabidopsis lyrata
AL4G37780 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 19544634-19545633 Arabidopsis lyrata
AL4G37780 1.0kb downstream 1.0kb downstream 3991   true scaffold_4: 19545634-19549624 Arabidopsis lyrata
AL4G37780 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 19548625-19549624 Arabidopsis lyrata
AL4G37780 2.0kb upstream 2.0kb upstream 4991   true scaffold_4: 19543634-19548624 Arabidopsis lyrata
AL4G37780 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 19543634-19545633 Arabidopsis lyrata
AL4G37780 2.0kb downstream 2.0kb downstream 4991   true scaffold_4: 19545634-19550624 Arabidopsis lyrata
AL4G37780 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 19548625-19550624 Arabidopsis lyrata
AL4G37780 5.0kb upstream 5.0kb upstream 7991   true scaffold_4: 19540634-19548624 Arabidopsis lyrata
AL4G37780 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 19540634-19545633 Arabidopsis lyrata
AL4G37780 5.0kb downstream 5.0kb downstream 7991   true scaffold_4: 19545634-19553624 Arabidopsis lyrata
AL4G37780 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 19548625-19553624 Arabidopsis lyrata
AL4G37780 10.0kb upstream 10.0kb upstream 12991   true scaffold_4: 19535634-19548624 Arabidopsis lyrata
AL4G37780 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 19535634-19545633 Arabidopsis lyrata
AL4G37780 10.0kb downstream 10.0kb downstream 12991   true scaffold_4: 19545634-19558624 Arabidopsis lyrata
AL4G37780 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 19548625-19558624 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367041 5261 Brassicaceae View MSA
123839381 5264 Brassicales-Malvales View MSA
124344734 5266 SBM View MSA
124240113 5268 Malvidae View MSA
124071120 5270 Rosid View MSA
123747360 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain