Gene : AL4G41660 A. lyrata v2.1

Defline:  (1 of 3) K17839 - polyamine oxidase (PAO4, PAO3, PAO2) Genomic Order:  2840
Name:  ? AL4G41660 Secondary Identifier:  ? PAC:35925278

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6441 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G41660 0.5kb upstream 0.5kb upstream 3687   true scaffold_4: 21037957-21041643 Arabidopsis lyrata
AL4G41660 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21037957-21038456 Arabidopsis lyrata
AL4G41660 0.5kb downstream 0.5kb downstream 3687   true scaffold_4: 21038457-21042143 Arabidopsis lyrata
AL4G41660 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21041644-21042143 Arabidopsis lyrata
AL4G41660 1.0kb upstream 1.0kb upstream 4187   true scaffold_4: 21037457-21041643 Arabidopsis lyrata
AL4G41660 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21037457-21038456 Arabidopsis lyrata
AL4G41660 1.0kb downstream 1.0kb downstream 4187   true scaffold_4: 21038457-21042643 Arabidopsis lyrata
AL4G41660 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21041644-21042643 Arabidopsis lyrata
AL4G41660 2.0kb upstream 2.0kb upstream 5187   true scaffold_4: 21036457-21041643 Arabidopsis lyrata
AL4G41660 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21036457-21038456 Arabidopsis lyrata
AL4G41660 2.0kb downstream 2.0kb downstream 5187   true scaffold_4: 21038457-21043643 Arabidopsis lyrata
AL4G41660 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21041644-21043643 Arabidopsis lyrata
AL4G41660 5.0kb upstream 5.0kb upstream 8187   true scaffold_4: 21033457-21041643 Arabidopsis lyrata
AL4G41660 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21033457-21038456 Arabidopsis lyrata
AL4G41660 5.0kb downstream 5.0kb downstream 8187   true scaffold_4: 21038457-21046643 Arabidopsis lyrata
AL4G41660 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21041644-21046643 Arabidopsis lyrata
AL4G41660 10.0kb upstream 10.0kb upstream 13187   true scaffold_4: 21028457-21041643 Arabidopsis lyrata
AL4G41660 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21028457-21038456 Arabidopsis lyrata
AL4G41660 10.0kb downstream 10.0kb downstream 13187   true scaffold_4: 21038457-21051643 Arabidopsis lyrata
AL4G41660 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21041644-21051643 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373356 5261 Brassicaceae View MSA
123831271 5264 Brassicales-Malvales View MSA
124342575 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain