Gene : AL4G42040 A. lyrata v2.1

Defline:  (1 of 3) K01012 - biotin synthase (bioB) Genomic Order:  2876
Name:  ? AL4G42040 Secondary Identifier:  ? PAC:35924039

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1507 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42040 0.5kb upstream 0.5kb upstream 3096   true scaffold_4: 21194494-21197589 Arabidopsis lyrata
AL4G42040 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21197090-21197589 Arabidopsis lyrata
AL4G42040 0.5kb downstream 0.5kb downstream 3096   true scaffold_4: 21193994-21197089 Arabidopsis lyrata
AL4G42040 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21193994-21194493 Arabidopsis lyrata
AL4G42040 1.0kb upstream 1.0kb upstream 3596   true scaffold_4: 21194494-21198089 Arabidopsis lyrata
AL4G42040 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21197090-21198089 Arabidopsis lyrata
AL4G42040 1.0kb downstream 1.0kb downstream 3596   true scaffold_4: 21193494-21197089 Arabidopsis lyrata
AL4G42040 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21193494-21194493 Arabidopsis lyrata
AL4G42040 2.0kb upstream 2.0kb upstream 4596   true scaffold_4: 21194494-21199089 Arabidopsis lyrata
AL4G42040 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21197090-21199089 Arabidopsis lyrata
AL4G42040 2.0kb downstream 2.0kb downstream 4596   true scaffold_4: 21192494-21197089 Arabidopsis lyrata
AL4G42040 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21192494-21194493 Arabidopsis lyrata
AL4G42040 5.0kb upstream 5.0kb upstream 7596   true scaffold_4: 21194494-21202089 Arabidopsis lyrata
AL4G42040 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21197090-21202089 Arabidopsis lyrata
AL4G42040 5.0kb downstream 5.0kb downstream 7596   true scaffold_4: 21189494-21197089 Arabidopsis lyrata
AL4G42040 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21189494-21194493 Arabidopsis lyrata
AL4G42040 10.0kb upstream 10.0kb upstream 12596   true scaffold_4: 21194494-21207089 Arabidopsis lyrata
AL4G42040 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21197090-21207089 Arabidopsis lyrata
AL4G42040 10.0kb downstream 10.0kb downstream 12596   true scaffold_4: 21184494-21197089 Arabidopsis lyrata
AL4G42040 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21184494-21194493 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362825 5261 Brassicaceae View MSA
123834542 5264 Brassicales-Malvales View MSA
124350234 5266 SBM View MSA
124240985 5268 Malvidae View MSA
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain