Gene : AL4G40670 A. lyrata v2.1

Defline:  (1 of 2) PF10183 - ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) Genomic Order:  2747
Name:  ? AL4G40670 Secondary Identifier:  ? PAC:35923407

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G40670 0.5kb upstream 0.5kb upstream 1218   true scaffold_4: 20646563-20647780 Arabidopsis lyrata
AL4G40670 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 20646563-20647062 Arabidopsis lyrata
AL4G40670 0.5kb downstream 0.5kb downstream 1218   true scaffold_4: 20647063-20648280 Arabidopsis lyrata
AL4G40670 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 20647781-20648280 Arabidopsis lyrata
AL4G40670 1.0kb upstream 1.0kb upstream 1718   true scaffold_4: 20646063-20647780 Arabidopsis lyrata
AL4G40670 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 20646063-20647062 Arabidopsis lyrata
AL4G40670 1.0kb downstream 1.0kb downstream 1718   true scaffold_4: 20647063-20648780 Arabidopsis lyrata
AL4G40670 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 20647781-20648780 Arabidopsis lyrata
AL4G40670 2.0kb upstream 2.0kb upstream 2718   true scaffold_4: 20645063-20647780 Arabidopsis lyrata
AL4G40670 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 20645063-20647062 Arabidopsis lyrata
AL4G40670 2.0kb downstream 2.0kb downstream 2718   true scaffold_4: 20647063-20649780 Arabidopsis lyrata
AL4G40670 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 20647781-20649780 Arabidopsis lyrata
AL4G40670 5.0kb upstream 5.0kb upstream 5718   true scaffold_4: 20642063-20647780 Arabidopsis lyrata
AL4G40670 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 20642063-20647062 Arabidopsis lyrata
AL4G40670 5.0kb downstream 5.0kb downstream 5718   true scaffold_4: 20647063-20652780 Arabidopsis lyrata
AL4G40670 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 20647781-20652780 Arabidopsis lyrata
AL4G40670 10.0kb upstream 10.0kb upstream 10718   true scaffold_4: 20637063-20647780 Arabidopsis lyrata
AL4G40670 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 20637063-20647062 Arabidopsis lyrata
AL4G40670 10.0kb downstream 10.0kb downstream 10718   true scaffold_4: 20647063-20657780 Arabidopsis lyrata
AL4G40670 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 20647781-20657780 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369748 5261 Brassicaceae View MSA
123840771 5264 Brassicales-Malvales View MSA
124322782 5266 SBM View MSA
124253115 5268 Malvidae View MSA
124061504 5270 Rosid View MSA
123740259 5271 Pentapetalae View MSA
122791906 5272 Eudicot View MSA
122042658 5273 Angiosperm View MSA
121346631 5274 Embryophyte View MSA
123428408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain