Gene : AL4G44340 A. lyrata v2.1

Defline:  (1 of 3) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Genomic Order:  3098
Name:  ? AL4G44340 Secondary Identifier:  ? PAC:35925167

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G44340 0.5kb upstream 0.5kb upstream 2918   true scaffold_4: 22035365-22038282 Arabidopsis lyrata
AL4G44340 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 22037783-22038282 Arabidopsis lyrata
AL4G44340 0.5kb downstream 0.5kb downstream 2918   true scaffold_4: 22034865-22037782 Arabidopsis lyrata
AL4G44340 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 22034865-22035364 Arabidopsis lyrata
AL4G44340 1.0kb upstream 1.0kb upstream 3418   true scaffold_4: 22035365-22038782 Arabidopsis lyrata
AL4G44340 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 22037783-22038782 Arabidopsis lyrata
AL4G44340 1.0kb downstream 1.0kb downstream 3418   true scaffold_4: 22034365-22037782 Arabidopsis lyrata
AL4G44340 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 22034365-22035364 Arabidopsis lyrata
AL4G44340 2.0kb upstream 2.0kb upstream 4418   true scaffold_4: 22035365-22039782 Arabidopsis lyrata
AL4G44340 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 22037783-22039782 Arabidopsis lyrata
AL4G44340 2.0kb downstream 2.0kb downstream 4418   true scaffold_4: 22033365-22037782 Arabidopsis lyrata
AL4G44340 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 22033365-22035364 Arabidopsis lyrata
AL4G44340 5.0kb upstream 5.0kb upstream 7418   true scaffold_4: 22035365-22042782 Arabidopsis lyrata
AL4G44340 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 22037783-22042782 Arabidopsis lyrata
AL4G44340 5.0kb downstream 5.0kb downstream 7418   true scaffold_4: 22030365-22037782 Arabidopsis lyrata
AL4G44340 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 22030365-22035364 Arabidopsis lyrata
AL4G44340 10.0kb upstream 10.0kb upstream 12418   true scaffold_4: 22035365-22047782 Arabidopsis lyrata
AL4G44340 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 22037783-22047782 Arabidopsis lyrata
AL4G44340 10.0kb downstream 10.0kb downstream 12418   true scaffold_4: 22025365-22037782 Arabidopsis lyrata
AL4G44340 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 22025365-22035364 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367798 5261 Brassicaceae View MSA
123832667 5264 Brassicales-Malvales View MSA
124337029 5266 SBM View MSA
124245744 5268 Malvidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain