Gene : AL4G44090 A. lyrata v2.1

Defline:  (1 of 1) 1.13.11.68 - 9-cis-beta-carotene 9',10'-cleaving dioxygenase Genomic Order:  3074
Name:  ? AL4G44090 Secondary Identifier:  ? PAC:35922299

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G44090 0.5kb upstream 0.5kb upstream 3245   true scaffold_4: 21940577-21943821 Arabidopsis lyrata
AL4G44090 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21940577-21941076 Arabidopsis lyrata
AL4G44090 0.5kb downstream 0.5kb downstream 3245   true scaffold_4: 21941077-21944321 Arabidopsis lyrata
AL4G44090 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21943822-21944321 Arabidopsis lyrata
AL4G44090 1.0kb upstream 1.0kb upstream 3745   true scaffold_4: 21940077-21943821 Arabidopsis lyrata
AL4G44090 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21940077-21941076 Arabidopsis lyrata
AL4G44090 1.0kb downstream 1.0kb downstream 3745   true scaffold_4: 21941077-21944821 Arabidopsis lyrata
AL4G44090 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21943822-21944821 Arabidopsis lyrata
AL4G44090 2.0kb upstream 2.0kb upstream 4745   true scaffold_4: 21939077-21943821 Arabidopsis lyrata
AL4G44090 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21939077-21941076 Arabidopsis lyrata
AL4G44090 2.0kb downstream 2.0kb downstream 4745   true scaffold_4: 21941077-21945821 Arabidopsis lyrata
AL4G44090 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21943822-21945821 Arabidopsis lyrata
AL4G44090 5.0kb upstream 5.0kb upstream 7745   true scaffold_4: 21936077-21943821 Arabidopsis lyrata
AL4G44090 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21936077-21941076 Arabidopsis lyrata
AL4G44090 5.0kb downstream 5.0kb downstream 7745   true scaffold_4: 21941077-21948821 Arabidopsis lyrata
AL4G44090 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21943822-21948821 Arabidopsis lyrata
AL4G44090 10.0kb upstream 10.0kb upstream 12745   true scaffold_4: 21931077-21943821 Arabidopsis lyrata
AL4G44090 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21931077-21941076 Arabidopsis lyrata
AL4G44090 10.0kb downstream 10.0kb downstream 12745   true scaffold_4: 21941077-21953821 Arabidopsis lyrata
AL4G44090 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21943822-21953821 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364004 5261 Brassicaceae View MSA
123829529 5264 Brassicales-Malvales View MSA
124346337 5266 SBM View MSA
124240991 5268 Malvidae View MSA
124061510 5270 Rosid View MSA
123739443 5271 Pentapetalae View MSA
122788061 5272 Eudicot View MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain