Gene : AL4G43740 A. lyrata v2.1

Defline:  (1 of 3) PTHR31529:SF7 - LOB DOMAIN-CONTAINING PROTEIN 19-RELATED Genomic Order:  3040
Name:  ? AL4G43740 Secondary Identifier:  ? PAC:35922338

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G43740 0.5kb upstream 0.5kb upstream 1238   true scaffold_4: 21774180-21775417 Arabidopsis lyrata
AL4G43740 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21774918-21775417 Arabidopsis lyrata
AL4G43740 0.5kb downstream 0.5kb downstream 1238   true scaffold_4: 21773680-21774917 Arabidopsis lyrata
AL4G43740 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21773680-21774179 Arabidopsis lyrata
AL4G43740 1.0kb upstream 1.0kb upstream 1738   true scaffold_4: 21774180-21775917 Arabidopsis lyrata
AL4G43740 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21774918-21775917 Arabidopsis lyrata
AL4G43740 1.0kb downstream 1.0kb downstream 1738   true scaffold_4: 21773180-21774917 Arabidopsis lyrata
AL4G43740 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21773180-21774179 Arabidopsis lyrata
AL4G43740 2.0kb upstream 2.0kb upstream 2738   true scaffold_4: 21774180-21776917 Arabidopsis lyrata
AL4G43740 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21774918-21776917 Arabidopsis lyrata
AL4G43740 2.0kb downstream 2.0kb downstream 2738   true scaffold_4: 21772180-21774917 Arabidopsis lyrata
AL4G43740 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21772180-21774179 Arabidopsis lyrata
AL4G43740 5.0kb upstream 5.0kb upstream 5738   true scaffold_4: 21774180-21779917 Arabidopsis lyrata
AL4G43740 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21774918-21779917 Arabidopsis lyrata
AL4G43740 5.0kb downstream 5.0kb downstream 5738   true scaffold_4: 21769180-21774917 Arabidopsis lyrata
AL4G43740 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21769180-21774179 Arabidopsis lyrata
AL4G43740 10.0kb upstream 10.0kb upstream 10738   true scaffold_4: 21774180-21784917 Arabidopsis lyrata
AL4G43740 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21774918-21784917 Arabidopsis lyrata
AL4G43740 10.0kb downstream 10.0kb downstream 10738   true scaffold_4: 21764180-21774917 Arabidopsis lyrata
AL4G43740 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21764180-21774179 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122322868 5261 Brassicaceae Singleton cluster - no MSA
123764448 5264 Brassicales-Malvales Singleton cluster - no MSA
124263079 5266 SBM Singleton cluster - no MSA
124252422 5268 Malvidae View MSA
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain