Gene : AL4G42860 A. lyrata v2.1

Defline:  (1 of 1) PTHR14217:SF1 - INOSITOL-TETRAKISPHOSPHATE 1-KINASE Genomic Order:  2955
Name:  ? AL4G42860 Secondary Identifier:  ? PAC:35921790

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6365 Arabidopsis lyrata pathologic  
Alyrata PWY-6366 Arabidopsis lyrata pathologic  
Alyrata PWY-6554 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42860 0.5kb upstream 0.5kb upstream 3900   true scaffold_4: 21457351-21461250 Arabidopsis lyrata
AL4G42860 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21460751-21461250 Arabidopsis lyrata
AL4G42860 0.5kb downstream 0.5kb downstream 3900   true scaffold_4: 21456851-21460750 Arabidopsis lyrata
AL4G42860 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21456851-21457350 Arabidopsis lyrata
AL4G42860 1.0kb upstream 1.0kb upstream 4400   true scaffold_4: 21457351-21461750 Arabidopsis lyrata
AL4G42860 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21460751-21461750 Arabidopsis lyrata
AL4G42860 1.0kb downstream 1.0kb downstream 4400   true scaffold_4: 21456351-21460750 Arabidopsis lyrata
AL4G42860 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21456351-21457350 Arabidopsis lyrata
AL4G42860 2.0kb upstream 2.0kb upstream 5400   true scaffold_4: 21457351-21462750 Arabidopsis lyrata
AL4G42860 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21460751-21462750 Arabidopsis lyrata
AL4G42860 2.0kb downstream 2.0kb downstream 5400   true scaffold_4: 21455351-21460750 Arabidopsis lyrata
AL4G42860 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21455351-21457350 Arabidopsis lyrata
AL4G42860 5.0kb upstream 5.0kb upstream 8400   true scaffold_4: 21457351-21465750 Arabidopsis lyrata
AL4G42860 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21460751-21465750 Arabidopsis lyrata
AL4G42860 5.0kb downstream 5.0kb downstream 8400   true scaffold_4: 21452351-21460750 Arabidopsis lyrata
AL4G42860 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21452351-21457350 Arabidopsis lyrata
AL4G42860 10.0kb upstream 10.0kb upstream 13400   true scaffold_4: 21457351-21470750 Arabidopsis lyrata
AL4G42860 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21460751-21470750 Arabidopsis lyrata
AL4G42860 10.0kb downstream 10.0kb downstream 13400   true scaffold_4: 21447351-21460750 Arabidopsis lyrata
AL4G42860 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21447351-21457350 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369178 5261 Brassicaceae View MSA
123831358 5264 Brassicales-Malvales View MSA
124343367 5266 SBM View MSA
124239106 5268 Malvidae View MSA
124062459 5270 Rosid View MSA
123738730 5271 Pentapetalae View MSA
122785749 5272 Eudicot View MSA
122045503 5273 Angiosperm View MSA
121345915 5274 Embryophyte View MSA
123428316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain