Gene : AL4G43330 A. lyrata v2.1

Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  3000
Name:  ? AL4G43330 Secondary Identifier:  ? PAC:35922619

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLYOXYLATE-BYPASS Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY-6549 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G43330 0.5kb upstream 0.5kb upstream 5022   true scaffold_4: 21626361-21631382 Arabidopsis lyrata
AL4G43330 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21626361-21626860 Arabidopsis lyrata
AL4G43330 0.5kb downstream 0.5kb downstream 5022   true scaffold_4: 21626861-21631882 Arabidopsis lyrata
AL4G43330 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21631383-21631882 Arabidopsis lyrata
AL4G43330 1.0kb upstream 1.0kb upstream 5522   true scaffold_4: 21625861-21631382 Arabidopsis lyrata
AL4G43330 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21625861-21626860 Arabidopsis lyrata
AL4G43330 1.0kb downstream 1.0kb downstream 5522   true scaffold_4: 21626861-21632382 Arabidopsis lyrata
AL4G43330 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21631383-21632382 Arabidopsis lyrata
AL4G43330 2.0kb upstream 2.0kb upstream 6522   true scaffold_4: 21624861-21631382 Arabidopsis lyrata
AL4G43330 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21624861-21626860 Arabidopsis lyrata
AL4G43330 2.0kb downstream 2.0kb downstream 6522   true scaffold_4: 21626861-21633382 Arabidopsis lyrata
AL4G43330 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21631383-21633382 Arabidopsis lyrata
AL4G43330 5.0kb upstream 5.0kb upstream 9522   true scaffold_4: 21621861-21631382 Arabidopsis lyrata
AL4G43330 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21621861-21626860 Arabidopsis lyrata
AL4G43330 5.0kb downstream 5.0kb downstream 9522   true scaffold_4: 21626861-21636382 Arabidopsis lyrata
AL4G43330 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21631383-21636382 Arabidopsis lyrata
AL4G43330 10.0kb upstream 10.0kb upstream 14522   true scaffold_4: 21616861-21631382 Arabidopsis lyrata
AL4G43330 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21616861-21626860 Arabidopsis lyrata
AL4G43330 10.0kb downstream 10.0kb downstream 14522   true scaffold_4: 21626861-21641382 Arabidopsis lyrata
AL4G43330 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21631383-21641382 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
122364825 5261 Brassicaceae View MSA
123832003 5264 Brassicales-Malvales View MSA
124343675 5266 SBM View MSA
124250397 5268 Malvidae View MSA
124068700 5270 Rosid View MSA
123737684 5271 Pentapetalae View MSA
122792616 5272 Eudicot View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain