Gene : AL4G43450 A. lyrata v2.1

Defline:  (1 of 36) K01188 - beta-glucosidase (E3.2.1.21) Genomic Order:  3011
Name:  ? AL4G43450 Secondary Identifier:  ? PAC:35924441

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5176 Arabidopsis lyrata pathologic  
Alyrata PWY-7089 Arabidopsis lyrata pathologic  
Alyrata PWY-7091 Arabidopsis lyrata pathologic  
Alyrata PWY-7092 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G43450 0.5kb upstream 0.5kb upstream 4995   true scaffold_4: 21662571-21667565 Arabidopsis lyrata
AL4G43450 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21662571-21663070 Arabidopsis lyrata
AL4G43450 0.5kb downstream 0.5kb downstream 4995   true scaffold_4: 21663071-21668065 Arabidopsis lyrata
AL4G43450 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21667566-21668065 Arabidopsis lyrata
AL4G43450 1.0kb upstream 1.0kb upstream 5495   true scaffold_4: 21662071-21667565 Arabidopsis lyrata
AL4G43450 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21662071-21663070 Arabidopsis lyrata
AL4G43450 1.0kb downstream 1.0kb downstream 5495   true scaffold_4: 21663071-21668565 Arabidopsis lyrata
AL4G43450 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21667566-21668565 Arabidopsis lyrata
AL4G43450 2.0kb upstream 2.0kb upstream 6495   true scaffold_4: 21661071-21667565 Arabidopsis lyrata
AL4G43450 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21661071-21663070 Arabidopsis lyrata
AL4G43450 2.0kb downstream 2.0kb downstream 6495   true scaffold_4: 21663071-21669565 Arabidopsis lyrata
AL4G43450 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21667566-21669565 Arabidopsis lyrata
AL4G43450 5.0kb upstream 5.0kb upstream 9495   true scaffold_4: 21658071-21667565 Arabidopsis lyrata
AL4G43450 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21658071-21663070 Arabidopsis lyrata
AL4G43450 5.0kb downstream 5.0kb downstream 9495   true scaffold_4: 21663071-21672565 Arabidopsis lyrata
AL4G43450 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21667566-21672565 Arabidopsis lyrata
AL4G43450 10.0kb upstream 10.0kb upstream 14495   true scaffold_4: 21653071-21667565 Arabidopsis lyrata
AL4G43450 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21653071-21663070 Arabidopsis lyrata
AL4G43450 10.0kb downstream 10.0kb downstream 14495   true scaffold_4: 21663071-21677565 Arabidopsis lyrata
AL4G43450 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21667566-21677565 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691541 5273 Angiosperm View MSA
122369542 5261 Brassicaceae View MSA
123839918 5264 Brassicales-Malvales View MSA
124322666 5266 SBM View MSA
124252768 5268 Malvidae View MSA
124073758 5270 Rosid View MSA
123647504 5271 Pentapetalae View MSA
122681476 5272 Eudicot View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain