Gene : AL4G42430 A. lyrata v2.1

Defline:  (1 of 7) PTHR22595:SF37 - CHITINASE-RELATED Genomic Order:  2912
Name:  ? AL4G42430 Secondary Identifier:  ? PAC:35925155

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6902 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42430 0.5kb upstream 0.5kb upstream 1865   true scaffold_4: 21317685-21319549 Arabidopsis lyrata
AL4G42430 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21319050-21319549 Arabidopsis lyrata
AL4G42430 0.5kb downstream 0.5kb downstream 1865   true scaffold_4: 21317185-21319049 Arabidopsis lyrata
AL4G42430 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21317185-21317684 Arabidopsis lyrata
AL4G42430 1.0kb upstream 1.0kb upstream 2365   true scaffold_4: 21317685-21320049 Arabidopsis lyrata
AL4G42430 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21319050-21320049 Arabidopsis lyrata
AL4G42430 1.0kb downstream 1.0kb downstream 2365   true scaffold_4: 21316685-21319049 Arabidopsis lyrata
AL4G42430 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21316685-21317684 Arabidopsis lyrata
AL4G42430 2.0kb upstream 2.0kb upstream 3365   true scaffold_4: 21317685-21321049 Arabidopsis lyrata
AL4G42430 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21319050-21321049 Arabidopsis lyrata
AL4G42430 2.0kb downstream 2.0kb downstream 3365   true scaffold_4: 21315685-21319049 Arabidopsis lyrata
AL4G42430 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21315685-21317684 Arabidopsis lyrata
AL4G42430 5.0kb upstream 5.0kb upstream 6365   true scaffold_4: 21317685-21324049 Arabidopsis lyrata
AL4G42430 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21319050-21324049 Arabidopsis lyrata
AL4G42430 5.0kb downstream 5.0kb downstream 6365   true scaffold_4: 21312685-21319049 Arabidopsis lyrata
AL4G42430 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21312685-21317684 Arabidopsis lyrata
AL4G42430 10.0kb upstream 10.0kb upstream 11365   true scaffold_4: 21317685-21329049 Arabidopsis lyrata
AL4G42430 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21319050-21329049 Arabidopsis lyrata
AL4G42430 10.0kb downstream 10.0kb downstream 11365   true scaffold_4: 21307685-21319049 Arabidopsis lyrata
AL4G42430 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21307685-21317684 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
122370727 5261 Brassicaceae View MSA
123800030 5264 Brassicales-Malvales View MSA
124297491 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain