Gene : AL4G42760 A. lyrata v2.1

Defline:  (1 of 2) PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED Genomic Order:  2946
Name:  ? AL4G42760 Secondary Identifier:  ? PAC:35923078

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42760 0.5kb upstream 0.5kb upstream 2358   true scaffold_4: 21422015-21424372 Arabidopsis lyrata
AL4G42760 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21422015-21422514 Arabidopsis lyrata
AL4G42760 0.5kb downstream 0.5kb downstream 2358   true scaffold_4: 21422515-21424872 Arabidopsis lyrata
AL4G42760 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21424373-21424872 Arabidopsis lyrata
AL4G42760 1.0kb upstream 1.0kb upstream 2858   true scaffold_4: 21421515-21424372 Arabidopsis lyrata
AL4G42760 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21421515-21422514 Arabidopsis lyrata
AL4G42760 1.0kb downstream 1.0kb downstream 2858   true scaffold_4: 21422515-21425372 Arabidopsis lyrata
AL4G42760 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21424373-21425372 Arabidopsis lyrata
AL4G42760 2.0kb upstream 2.0kb upstream 3858   true scaffold_4: 21420515-21424372 Arabidopsis lyrata
AL4G42760 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21420515-21422514 Arabidopsis lyrata
AL4G42760 2.0kb downstream 2.0kb downstream 3858   true scaffold_4: 21422515-21426372 Arabidopsis lyrata
AL4G42760 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21424373-21426372 Arabidopsis lyrata
AL4G42760 5.0kb upstream 5.0kb upstream 6858   true scaffold_4: 21417515-21424372 Arabidopsis lyrata
AL4G42760 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21417515-21422514 Arabidopsis lyrata
AL4G42760 5.0kb downstream 5.0kb downstream 6858   true scaffold_4: 21422515-21429372 Arabidopsis lyrata
AL4G42760 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21424373-21429372 Arabidopsis lyrata
AL4G42760 10.0kb upstream 10.0kb upstream 11858   true scaffold_4: 21412515-21424372 Arabidopsis lyrata
AL4G42760 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21412515-21422514 Arabidopsis lyrata
AL4G42760 10.0kb downstream 10.0kb downstream 11858   true scaffold_4: 21422515-21434372 Arabidopsis lyrata
AL4G42760 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21424373-21434372 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363034 5261 Brassicaceae View MSA
123839902 5264 Brassicales-Malvales View MSA
124322664 5266 SBM View MSA
124241850 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain