Gene : AL4G42810 A. lyrata v2.1

Defline:  (1 of 2) 2.1.1.165 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  2950
Name:  ? AL4G42810 Secondary Identifier:  ? PAC:35923937

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6730 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42810 0.5kb upstream 0.5kb upstream 2287   true scaffold_4: 21442424-21444710 Arabidopsis lyrata
AL4G42810 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21444211-21444710 Arabidopsis lyrata
AL4G42810 0.5kb downstream 0.5kb downstream 2287   true scaffold_4: 21441924-21444210 Arabidopsis lyrata
AL4G42810 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21441924-21442423 Arabidopsis lyrata
AL4G42810 1.0kb upstream 1.0kb upstream 2787   true scaffold_4: 21442424-21445210 Arabidopsis lyrata
AL4G42810 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21444211-21445210 Arabidopsis lyrata
AL4G42810 1.0kb downstream 1.0kb downstream 2787   true scaffold_4: 21441424-21444210 Arabidopsis lyrata
AL4G42810 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21441424-21442423 Arabidopsis lyrata
AL4G42810 2.0kb upstream 2.0kb upstream 3787   true scaffold_4: 21442424-21446210 Arabidopsis lyrata
AL4G42810 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21444211-21446210 Arabidopsis lyrata
AL4G42810 2.0kb downstream 2.0kb downstream 3787   true scaffold_4: 21440424-21444210 Arabidopsis lyrata
AL4G42810 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21440424-21442423 Arabidopsis lyrata
AL4G42810 5.0kb upstream 5.0kb upstream 6787   true scaffold_4: 21442424-21449210 Arabidopsis lyrata
AL4G42810 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21444211-21449210 Arabidopsis lyrata
AL4G42810 5.0kb downstream 5.0kb downstream 6787   true scaffold_4: 21437424-21444210 Arabidopsis lyrata
AL4G42810 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21437424-21442423 Arabidopsis lyrata
AL4G42810 10.0kb upstream 10.0kb upstream 11787   true scaffold_4: 21442424-21454210 Arabidopsis lyrata
AL4G42810 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21444211-21454210 Arabidopsis lyrata
AL4G42810 10.0kb downstream 10.0kb downstream 11787   true scaffold_4: 21432424-21444210 Arabidopsis lyrata
AL4G42810 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21432424-21442423 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122369932 5261 Brassicaceae View MSA
123830657 5264 Brassicales-Malvales View MSA
124340535 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain