Gene : AL4G42780 A. lyrata v2.1

Defline:  (1 of 1) 2.1.1.9 - Thiol S-methyltransferase Genomic Order:  2948
Name:  ? AL4G42780 Secondary Identifier:  ? PAC:35924355

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6730 Arabidopsis lyrata pathologic  
Alyrata PWY-6736 Arabidopsis lyrata pathologic  
Alyrata PWY-6842 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42780 0.5kb upstream 0.5kb upstream 3211   true scaffold_4: 21430200-21433410 Arabidopsis lyrata
AL4G42780 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21432911-21433410 Arabidopsis lyrata
AL4G42780 0.5kb downstream 0.5kb downstream 3211   true scaffold_4: 21429700-21432910 Arabidopsis lyrata
AL4G42780 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21429700-21430199 Arabidopsis lyrata
AL4G42780 1.0kb upstream 1.0kb upstream 3711   true scaffold_4: 21430200-21433910 Arabidopsis lyrata
AL4G42780 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21432911-21433910 Arabidopsis lyrata
AL4G42780 1.0kb downstream 1.0kb downstream 3711   true scaffold_4: 21429200-21432910 Arabidopsis lyrata
AL4G42780 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21429200-21430199 Arabidopsis lyrata
AL4G42780 2.0kb upstream 2.0kb upstream 4711   true scaffold_4: 21430200-21434910 Arabidopsis lyrata
AL4G42780 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21432911-21434910 Arabidopsis lyrata
AL4G42780 2.0kb downstream 2.0kb downstream 4711   true scaffold_4: 21428200-21432910 Arabidopsis lyrata
AL4G42780 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21428200-21430199 Arabidopsis lyrata
AL4G42780 5.0kb upstream 5.0kb upstream 7711   true scaffold_4: 21430200-21437910 Arabidopsis lyrata
AL4G42780 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21432911-21437910 Arabidopsis lyrata
AL4G42780 5.0kb downstream 5.0kb downstream 7711   true scaffold_4: 21425200-21432910 Arabidopsis lyrata
AL4G42780 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21425200-21430199 Arabidopsis lyrata
AL4G42780 10.0kb upstream 10.0kb upstream 12711   true scaffold_4: 21430200-21442910 Arabidopsis lyrata
AL4G42780 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21432911-21442910 Arabidopsis lyrata
AL4G42780 10.0kb downstream 10.0kb downstream 12711   true scaffold_4: 21420200-21432910 Arabidopsis lyrata
AL4G42780 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21420200-21430199 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122379294 5261 Brassicaceae View MSA
123802194 5264 Brassicales-Malvales View MSA
124299408 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain