Gene : AL4G46880 A. lyrata v2.1
Defline:  (1 of 2) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  3342
Name:  ? AL4G46880 Secondary Identifier:  ? PAC:35923664
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G46880 0.5kb upstream 0.5kb upstream 2038   true scaffold_4: 23000531-23002568 Arabidopsis lyrata
AL4G46880 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 23000531-23001030 Arabidopsis lyrata
AL4G46880 0.5kb downstream 0.5kb downstream 2038   true scaffold_4: 23001031-23003068 Arabidopsis lyrata
AL4G46880 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 23002569-23003068 Arabidopsis lyrata
AL4G46880 1.0kb upstream 1.0kb upstream 2538   true scaffold_4: 23000031-23002568 Arabidopsis lyrata
AL4G46880 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 23000031-23001030 Arabidopsis lyrata
AL4G46880 1.0kb downstream 1.0kb downstream 2538   true scaffold_4: 23001031-23003568 Arabidopsis lyrata
AL4G46880 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 23002569-23003568 Arabidopsis lyrata
AL4G46880 2.0kb upstream 2.0kb upstream 3538   true scaffold_4: 22999031-23002568 Arabidopsis lyrata
AL4G46880 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 22999031-23001030 Arabidopsis lyrata
AL4G46880 2.0kb downstream 2.0kb downstream 3538   true scaffold_4: 23001031-23004568 Arabidopsis lyrata
AL4G46880 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 23002569-23004568 Arabidopsis lyrata
AL4G46880 5.0kb upstream 5.0kb upstream 6538   true scaffold_4: 22996031-23002568 Arabidopsis lyrata
AL4G46880 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 22996031-23001030 Arabidopsis lyrata
AL4G46880 5.0kb downstream 5.0kb downstream 6538   true scaffold_4: 23001031-23007568 Arabidopsis lyrata
AL4G46880 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 23002569-23007568 Arabidopsis lyrata
AL4G46880 10.0kb upstream 10.0kb upstream 11538   true scaffold_4: 22991031-23002568 Arabidopsis lyrata
AL4G46880 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 22991031-23001030 Arabidopsis lyrata
AL4G46880 10.0kb downstream 10.0kb downstream 11538   true scaffold_4: 23001031-23012568 Arabidopsis lyrata
AL4G46880 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 23002569-23012568 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362646 5261 Brassicaceae View MSA
123841585 5264 Brassicales-Malvales View MSA
124345104 5266 SBM View MSA
124253889 5268 Malvidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain