Gene : AL4G46280 A. lyrata v2.1

Defline:  (1 of 3) PTHR11969:SF29 - TRANSCRIPTION FACTOR BHLH57-RELATED Genomic Order:  3286
Name:  ? AL4G46280 Secondary Identifier:  ? PAC:35925217

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G46280 0.5kb upstream 0.5kb upstream 2937   true scaffold_4: 22779290-22782226 Arabidopsis lyrata
AL4G46280 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 22779290-22779789 Arabidopsis lyrata
AL4G46280 0.5kb downstream 0.5kb downstream 2937   true scaffold_4: 22779790-22782726 Arabidopsis lyrata
AL4G46280 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 22782227-22782726 Arabidopsis lyrata
AL4G46280 1.0kb upstream 1.0kb upstream 3437   true scaffold_4: 22778790-22782226 Arabidopsis lyrata
AL4G46280 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 22778790-22779789 Arabidopsis lyrata
AL4G46280 1.0kb downstream 1.0kb downstream 3437   true scaffold_4: 22779790-22783226 Arabidopsis lyrata
AL4G46280 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 22782227-22783226 Arabidopsis lyrata
AL4G46280 2.0kb upstream 2.0kb upstream 4437   true scaffold_4: 22777790-22782226 Arabidopsis lyrata
AL4G46280 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 22777790-22779789 Arabidopsis lyrata
AL4G46280 2.0kb downstream 2.0kb downstream 4437   true scaffold_4: 22779790-22784226 Arabidopsis lyrata
AL4G46280 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 22782227-22784226 Arabidopsis lyrata
AL4G46280 5.0kb upstream 5.0kb upstream 7437   true scaffold_4: 22774790-22782226 Arabidopsis lyrata
AL4G46280 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 22774790-22779789 Arabidopsis lyrata
AL4G46280 5.0kb downstream 5.0kb downstream 7437   true scaffold_4: 22779790-22787226 Arabidopsis lyrata
AL4G46280 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 22782227-22787226 Arabidopsis lyrata
AL4G46280 10.0kb upstream 10.0kb upstream 12437   true scaffold_4: 22769790-22782226 Arabidopsis lyrata
AL4G46280 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 22769790-22779789 Arabidopsis lyrata
AL4G46280 10.0kb downstream 10.0kb downstream 12437   true scaffold_4: 22779790-22792226 Arabidopsis lyrata
AL4G46280 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 22782227-22792226 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376907 5261 Brassicaceae View MSA
123801391 5264 Brassicales-Malvales View MSA
124350390 5266 SBM View MSA
124245244 5268 Malvidae View MSA
124067472 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain