Gene : AL5G10450 A. lyrata v2.1

Defline:  (1 of 2) K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Genomic Order:  40
Name:  ? AL5G10450 Secondary Identifier:  ? PAC:35920866

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G10450 0.5kb upstream 0.5kb upstream 2907   true scaffold_5: 237342-240248 Arabidopsis lyrata
AL5G10450 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 239749-240248 Arabidopsis lyrata
AL5G10450 0.5kb downstream 0.5kb downstream 2907   true scaffold_5: 236842-239748 Arabidopsis lyrata
AL5G10450 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 236842-237341 Arabidopsis lyrata
AL5G10450 1.0kb upstream 1.0kb upstream 3407   true scaffold_5: 237342-240748 Arabidopsis lyrata
AL5G10450 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 239749-240748 Arabidopsis lyrata
AL5G10450 1.0kb downstream 1.0kb downstream 3407   true scaffold_5: 236342-239748 Arabidopsis lyrata
AL5G10450 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 236342-237341 Arabidopsis lyrata
AL5G10450 2.0kb upstream 2.0kb upstream 4407   true scaffold_5: 237342-241748 Arabidopsis lyrata
AL5G10450 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 239749-241748 Arabidopsis lyrata
AL5G10450 2.0kb downstream 2.0kb downstream 4407   true scaffold_5: 235342-239748 Arabidopsis lyrata
AL5G10450 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 235342-237341 Arabidopsis lyrata
AL5G10450 5.0kb upstream 5.0kb upstream 7407   true scaffold_5: 237342-244748 Arabidopsis lyrata
AL5G10450 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 239749-244748 Arabidopsis lyrata
AL5G10450 5.0kb downstream 5.0kb downstream 7407   true scaffold_5: 232342-239748 Arabidopsis lyrata
AL5G10450 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 232342-237341 Arabidopsis lyrata
AL5G10450 10.0kb upstream 10.0kb upstream 12407   true scaffold_5: 237342-249748 Arabidopsis lyrata
AL5G10450 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 239749-249748 Arabidopsis lyrata
AL5G10450 10.0kb downstream 10.0kb downstream 12407   true scaffold_5: 227342-239748 Arabidopsis lyrata
AL5G10450 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 227342-237341 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360939 5261 Brassicaceae View MSA
123831353 5264 Brassicales-Malvales View MSA
124344126 5266 SBM View MSA
124241727 5268 Malvidae View MSA
124066730 5270 Rosid View MSA
123739109 5271 Pentapetalae View MSA
122787428 5272 Eudicot View MSA
122046162 5273 Angiosperm View MSA
121350102 5274 Embryophyte View MSA
123428772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain