Gene : AL5G10810 A. lyrata v2.1

Defline:  (1 of 2) K12666 - oligosaccharyltransferase complex subunit alpha (ribophorin I) (OST1, RPN1) Genomic Order:  74
Name:  ? AL5G10810 Secondary Identifier:  ? PAC:35918750

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G10810 0.5kb upstream 0.5kb upstream 3865   true scaffold_5: 400826-404690 Arabidopsis lyrata
AL5G10810 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 404191-404690 Arabidopsis lyrata
AL5G10810 0.5kb downstream 0.5kb downstream 3865   true scaffold_5: 400326-404190 Arabidopsis lyrata
AL5G10810 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 400326-400825 Arabidopsis lyrata
AL5G10810 1.0kb upstream 1.0kb upstream 4365   true scaffold_5: 400826-405190 Arabidopsis lyrata
AL5G10810 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 404191-405190 Arabidopsis lyrata
AL5G10810 1.0kb downstream 1.0kb downstream 4365   true scaffold_5: 399826-404190 Arabidopsis lyrata
AL5G10810 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 399826-400825 Arabidopsis lyrata
AL5G10810 2.0kb upstream 2.0kb upstream 5365   true scaffold_5: 400826-406190 Arabidopsis lyrata
AL5G10810 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 404191-406190 Arabidopsis lyrata
AL5G10810 2.0kb downstream 2.0kb downstream 5365   true scaffold_5: 398826-404190 Arabidopsis lyrata
AL5G10810 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 398826-400825 Arabidopsis lyrata
AL5G10810 5.0kb upstream 5.0kb upstream 8365   true scaffold_5: 400826-409190 Arabidopsis lyrata
AL5G10810 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 404191-409190 Arabidopsis lyrata
AL5G10810 5.0kb downstream 5.0kb downstream 8365   true scaffold_5: 395826-404190 Arabidopsis lyrata
AL5G10810 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 395826-400825 Arabidopsis lyrata
AL5G10810 10.0kb upstream 10.0kb upstream 13365   true scaffold_5: 400826-414190 Arabidopsis lyrata
AL5G10810 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 404191-414190 Arabidopsis lyrata
AL5G10810 10.0kb downstream 10.0kb downstream 13365   true scaffold_5: 390826-404190 Arabidopsis lyrata
AL5G10810 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 390826-400825 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368155 5261 Brassicaceae View MSA
123839296 5264 Brassicales-Malvales View MSA
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain