Gene : AL5G10130 A. lyrata v2.1

Defline:  (1 of 3) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  11
Name:  ? AL5G10130 Secondary Identifier:  ? PAC:35919059

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRIGLSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G10130 0.5kb upstream 0.5kb upstream 2405   true scaffold_5: 117467-119871 Arabidopsis lyrata
AL5G10130 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 119372-119871 Arabidopsis lyrata
AL5G10130 0.5kb downstream 0.5kb downstream 2405   true scaffold_5: 116967-119371 Arabidopsis lyrata
AL5G10130 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 116967-117466 Arabidopsis lyrata
AL5G10130 1.0kb upstream 1.0kb upstream 2905   true scaffold_5: 117467-120371 Arabidopsis lyrata
AL5G10130 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 119372-120371 Arabidopsis lyrata
AL5G10130 1.0kb downstream 1.0kb downstream 2905   true scaffold_5: 116467-119371 Arabidopsis lyrata
AL5G10130 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 116467-117466 Arabidopsis lyrata
AL5G10130 2.0kb upstream 2.0kb upstream 3905   true scaffold_5: 117467-121371 Arabidopsis lyrata
AL5G10130 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 119372-121371 Arabidopsis lyrata
AL5G10130 2.0kb downstream 2.0kb downstream 3905   true scaffold_5: 115467-119371 Arabidopsis lyrata
AL5G10130 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 115467-117466 Arabidopsis lyrata
AL5G10130 5.0kb upstream 5.0kb upstream 6905   true scaffold_5: 117467-124371 Arabidopsis lyrata
AL5G10130 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 119372-124371 Arabidopsis lyrata
AL5G10130 5.0kb downstream 5.0kb downstream 6905   true scaffold_5: 112467-119371 Arabidopsis lyrata
AL5G10130 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 112467-117466 Arabidopsis lyrata
AL5G10130 10.0kb upstream 10.0kb upstream 11905   true scaffold_5: 117467-129371 Arabidopsis lyrata
AL5G10130 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 119372-129371 Arabidopsis lyrata
AL5G10130 10.0kb downstream 10.0kb downstream 11905   true scaffold_5: 107467-119371 Arabidopsis lyrata
AL5G10130 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 107467-117466 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379040 5261 Brassicaceae View MSA
123839517 5264 Brassicales-Malvales View MSA
124322618 5266 SBM View MSA
124248265 5268 Malvidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain