Gene : AL5G10090 A. lyrata v2.1

Defline:  (1 of 1) PTHR11627:SF8 - FRUCTOSE-BISPHOSPHATE ALDOLASE 3, CHLOROPLASTIC-RELATED Genomic Order:  8
Name:  ? AL5G10090 Secondary Identifier:  ? PAC:35919960

Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata CALVIN-PWY Arabidopsis lyrata pathologic  
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-1042 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY66-373 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata SUCSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G10090 0.5kb upstream 0.5kb upstream 2269   true scaffold_5: 105693-107961 Arabidopsis lyrata
AL5G10090 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 107462-107961 Arabidopsis lyrata
AL5G10090 0.5kb downstream 0.5kb downstream 2269   true scaffold_5: 105193-107461 Arabidopsis lyrata
AL5G10090 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 105193-105692 Arabidopsis lyrata
AL5G10090 1.0kb upstream 1.0kb upstream 2769   true scaffold_5: 105693-108461 Arabidopsis lyrata
AL5G10090 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 107462-108461 Arabidopsis lyrata
AL5G10090 1.0kb downstream 1.0kb downstream 2769   true scaffold_5: 104693-107461 Arabidopsis lyrata
AL5G10090 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 104693-105692 Arabidopsis lyrata
AL5G10090 2.0kb upstream 2.0kb upstream 3769   true scaffold_5: 105693-109461 Arabidopsis lyrata
AL5G10090 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 107462-109461 Arabidopsis lyrata
AL5G10090 2.0kb downstream 2.0kb downstream 3769   true scaffold_5: 103693-107461 Arabidopsis lyrata
AL5G10090 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 103693-105692 Arabidopsis lyrata
AL5G10090 5.0kb upstream 5.0kb upstream 6769   true scaffold_5: 105693-112461 Arabidopsis lyrata
AL5G10090 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 107462-112461 Arabidopsis lyrata
AL5G10090 5.0kb downstream 5.0kb downstream 6769   true scaffold_5: 100693-107461 Arabidopsis lyrata
AL5G10090 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 100693-105692 Arabidopsis lyrata
AL5G10090 10.0kb upstream 10.0kb upstream 11769   true scaffold_5: 105693-117461 Arabidopsis lyrata
AL5G10090 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 107462-117461 Arabidopsis lyrata
AL5G10090 10.0kb downstream 10.0kb downstream 11769   true scaffold_5: 95693-107461 Arabidopsis lyrata
AL5G10090 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 95693-105692 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373193 5261 Brassicaceae View MSA
123828058 5264 Brassicales-Malvales View MSA
124343223 5266 SBM View MSA
124244605 5268 Malvidae View MSA
124069125 5270 Rosid View MSA
123742159 5271 Pentapetalae View MSA
122788432 5272 Eudicot View MSA
122043152 5273 Angiosperm View MSA
121348633 5274 Embryophyte View MSA
123424623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain