Gene : AL4G47460 A. lyrata v2.1

Defline:  (1 of 5) PTHR10168:SF57 - GLUTAREDOXIN-C13-RELATED Genomic Order:  3397
Name:  ? AL4G47460 Secondary Identifier:  ? PAC:35923677

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G47460 0.5kb upstream 0.5kb upstream 1103   true scaffold_4: 23227100-23228202 Arabidopsis lyrata
AL4G47460 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 23227100-23227599 Arabidopsis lyrata
AL4G47460 0.5kb downstream 0.5kb downstream 1103   true scaffold_4: 23227600-23228702 Arabidopsis lyrata
AL4G47460 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 23228203-23228702 Arabidopsis lyrata
AL4G47460 1.0kb upstream 1.0kb upstream 1603   true scaffold_4: 23226600-23228202 Arabidopsis lyrata
AL4G47460 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 23226600-23227599 Arabidopsis lyrata
AL4G47460 1.0kb downstream 1.0kb downstream 1603   true scaffold_4: 23227600-23229202 Arabidopsis lyrata
AL4G47460 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 23228203-23229202 Arabidopsis lyrata
AL4G47460 2.0kb upstream 2.0kb upstream 2603   true scaffold_4: 23225600-23228202 Arabidopsis lyrata
AL4G47460 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 23225600-23227599 Arabidopsis lyrata
AL4G47460 2.0kb downstream 2.0kb downstream 2603   true scaffold_4: 23227600-23230202 Arabidopsis lyrata
AL4G47460 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 23228203-23230202 Arabidopsis lyrata
AL4G47460 5.0kb upstream 5.0kb upstream 5603   true scaffold_4: 23222600-23228202 Arabidopsis lyrata
AL4G47460 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 23222600-23227599 Arabidopsis lyrata
AL4G47460 5.0kb downstream 5.0kb downstream 5603   true scaffold_4: 23227600-23233202 Arabidopsis lyrata
AL4G47460 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 23228203-23233202 Arabidopsis lyrata
AL4G47460 10.0kb upstream 10.0kb upstream 10603   true scaffold_4: 23217600-23228202 Arabidopsis lyrata
AL4G47460 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 23217600-23227599 Arabidopsis lyrata
AL4G47460 10.0kb downstream 10.0kb downstream 10603   true scaffold_4: 23227600-23238202 Arabidopsis lyrata
AL4G47460 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 23228203-23238202 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122372201 5261 Brassicaceae View MSA
123839290 5264 Brassicales-Malvales View MSA
124342010 5266 SBM View MSA
124253588 5268 Malvidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain