Gene : AL5G13700 A. lyrata v2.1

Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  325
Name:  ? AL5G13700 Secondary Identifier:  ? PAC:35919609

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G13700 0.5kb upstream 0.5kb upstream 3416   true scaffold_5: 2075302-2078717 Arabidopsis lyrata
AL5G13700 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 2075302-2075801 Arabidopsis lyrata
AL5G13700 0.5kb downstream 0.5kb downstream 3416   true scaffold_5: 2075802-2079217 Arabidopsis lyrata
AL5G13700 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 2078718-2079217 Arabidopsis lyrata
AL5G13700 1.0kb upstream 1.0kb upstream 3916   true scaffold_5: 2074802-2078717 Arabidopsis lyrata
AL5G13700 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 2074802-2075801 Arabidopsis lyrata
AL5G13700 1.0kb downstream 1.0kb downstream 3916   true scaffold_5: 2075802-2079717 Arabidopsis lyrata
AL5G13700 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 2078718-2079717 Arabidopsis lyrata
AL5G13700 2.0kb upstream 2.0kb upstream 4916   true scaffold_5: 2073802-2078717 Arabidopsis lyrata
AL5G13700 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 2073802-2075801 Arabidopsis lyrata
AL5G13700 2.0kb downstream 2.0kb downstream 4916   true scaffold_5: 2075802-2080717 Arabidopsis lyrata
AL5G13700 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 2078718-2080717 Arabidopsis lyrata
AL5G13700 5.0kb upstream 5.0kb upstream 7916   true scaffold_5: 2070802-2078717 Arabidopsis lyrata
AL5G13700 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 2070802-2075801 Arabidopsis lyrata
AL5G13700 5.0kb downstream 5.0kb downstream 7916   true scaffold_5: 2075802-2083717 Arabidopsis lyrata
AL5G13700 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 2078718-2083717 Arabidopsis lyrata
AL5G13700 10.0kb upstream 10.0kb upstream 12916   true scaffold_5: 2065802-2078717 Arabidopsis lyrata
AL5G13700 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 2065802-2075801 Arabidopsis lyrata
AL5G13700 10.0kb downstream 10.0kb downstream 12916   true scaffold_5: 2075802-2088717 Arabidopsis lyrata
AL5G13700 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 2078718-2088717 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370992 5261 Brassicaceae View MSA
123837986 5264 Brassicales-Malvales View MSA
124342146 5266 SBM View MSA
124253244 5268 Malvidae View MSA
124068330 5270 Rosid View MSA
123741800 5271 Pentapetalae View MSA
122793394 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain