Gene : AL5G12600 A. lyrata v2.1
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  227
Name:  ? AL5G12600 Secondary Identifier:  ? PAC:35919360
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G12600 0.5kb upstream 0.5kb upstream 2414   true scaffold_5: 1526983-1529396 Arabidopsis lyrata
AL5G12600 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 1526983-1527482 Arabidopsis lyrata
AL5G12600 0.5kb downstream 0.5kb downstream 2414   true scaffold_5: 1527483-1529896 Arabidopsis lyrata
AL5G12600 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 1529397-1529896 Arabidopsis lyrata
AL5G12600 1.0kb upstream 1.0kb upstream 2914   true scaffold_5: 1526483-1529396 Arabidopsis lyrata
AL5G12600 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 1526483-1527482 Arabidopsis lyrata
AL5G12600 1.0kb downstream 1.0kb downstream 2914   true scaffold_5: 1527483-1530396 Arabidopsis lyrata
AL5G12600 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 1529397-1530396 Arabidopsis lyrata
AL5G12600 2.0kb upstream 2.0kb upstream 3914   true scaffold_5: 1525483-1529396 Arabidopsis lyrata
AL5G12600 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 1525483-1527482 Arabidopsis lyrata
AL5G12600 2.0kb downstream 2.0kb downstream 3914   true scaffold_5: 1527483-1531396 Arabidopsis lyrata
AL5G12600 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 1529397-1531396 Arabidopsis lyrata
AL5G12600 5.0kb upstream 5.0kb upstream 6914   true scaffold_5: 1522483-1529396 Arabidopsis lyrata
AL5G12600 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 1522483-1527482 Arabidopsis lyrata
AL5G12600 5.0kb downstream 5.0kb downstream 6914   true scaffold_5: 1527483-1534396 Arabidopsis lyrata
AL5G12600 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 1529397-1534396 Arabidopsis lyrata
AL5G12600 10.0kb upstream 10.0kb upstream 11914   true scaffold_5: 1517483-1529396 Arabidopsis lyrata
AL5G12600 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 1517483-1527482 Arabidopsis lyrata
AL5G12600 10.0kb downstream 10.0kb downstream 11914   true scaffold_5: 1527483-1539396 Arabidopsis lyrata
AL5G12600 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 1529397-1539396 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377914 5261 Brassicaceae View MSA
123841181 5264 Brassicales-Malvales View MSA
124347410 5266 SBM View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain