Gene : AL5G11840 A. lyrata v2.1
Defline:  (1 of 1) K12839 - survival of motor neuron-related-splicing factor 30 (SMNDC1, SPF30) Genomic Order:  169
Name:  ? AL5G11840 Secondary Identifier:  ? PAC:35920258
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G11840 0.5kb upstream 0.5kb upstream 3219   true scaffold_5: 949454-952672 Arabidopsis lyrata
AL5G11840 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 952173-952672 Arabidopsis lyrata
AL5G11840 0.5kb downstream 0.5kb downstream 3219   true scaffold_5: 948954-952172 Arabidopsis lyrata
AL5G11840 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 948954-949453 Arabidopsis lyrata
AL5G11840 1.0kb upstream 1.0kb upstream 3719   true scaffold_5: 949454-953172 Arabidopsis lyrata
AL5G11840 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 952173-953172 Arabidopsis lyrata
AL5G11840 1.0kb downstream 1.0kb downstream 3719   true scaffold_5: 948454-952172 Arabidopsis lyrata
AL5G11840 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 948454-949453 Arabidopsis lyrata
AL5G11840 2.0kb upstream 2.0kb upstream 4719   true scaffold_5: 949454-954172 Arabidopsis lyrata
AL5G11840 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 952173-954172 Arabidopsis lyrata
AL5G11840 2.0kb downstream 2.0kb downstream 4719   true scaffold_5: 947454-952172 Arabidopsis lyrata
AL5G11840 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 947454-949453 Arabidopsis lyrata
AL5G11840 5.0kb upstream 5.0kb upstream 7719   true scaffold_5: 949454-957172 Arabidopsis lyrata
AL5G11840 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 952173-957172 Arabidopsis lyrata
AL5G11840 5.0kb downstream 5.0kb downstream 7719   true scaffold_5: 944454-952172 Arabidopsis lyrata
AL5G11840 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 944454-949453 Arabidopsis lyrata
AL5G11840 10.0kb upstream 10.0kb upstream 12719   true scaffold_5: 949454-962172 Arabidopsis lyrata
AL5G11840 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 952173-962172 Arabidopsis lyrata
AL5G11840 10.0kb downstream 10.0kb downstream 12719   true scaffold_5: 939454-952172 Arabidopsis lyrata
AL5G11840 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 939454-949453 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374958 5261 Brassicaceae View MSA
123835748 5264 Brassicales-Malvales View MSA
124338720 5266 SBM View MSA
124242162 5268 Malvidae View MSA
124061693 5270 Rosid View MSA
123752320 5271 Pentapetalae View MSA
122796716 5272 Eudicot View MSA
122043131 5273 Angiosperm View MSA
121344735 5274 Embryophyte View MSA
123424972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain