Gene : AL5G11430 A. lyrata v2.1
Defline:  (1 of 6) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  131
Name:  ? AL5G11430 Secondary Identifier:  ? PAC:35919306
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G11430 0.5kb upstream 0.5kb upstream 2145   true scaffold_5: 761675-763819 Arabidopsis lyrata
AL5G11430 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 763320-763819 Arabidopsis lyrata
AL5G11430 0.5kb downstream 0.5kb downstream 2145   true scaffold_5: 761175-763319 Arabidopsis lyrata
AL5G11430 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 761175-761674 Arabidopsis lyrata
AL5G11430 1.0kb upstream 1.0kb upstream 2645   true scaffold_5: 761675-764319 Arabidopsis lyrata
AL5G11430 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 763320-764319 Arabidopsis lyrata
AL5G11430 1.0kb downstream 1.0kb downstream 2645   true scaffold_5: 760675-763319 Arabidopsis lyrata
AL5G11430 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 760675-761674 Arabidopsis lyrata
AL5G11430 2.0kb upstream 2.0kb upstream 3645   true scaffold_5: 761675-765319 Arabidopsis lyrata
AL5G11430 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 763320-765319 Arabidopsis lyrata
AL5G11430 2.0kb downstream 2.0kb downstream 3645   true scaffold_5: 759675-763319 Arabidopsis lyrata
AL5G11430 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 759675-761674 Arabidopsis lyrata
AL5G11430 5.0kb upstream 5.0kb upstream 6645   true scaffold_5: 761675-768319 Arabidopsis lyrata
AL5G11430 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 763320-768319 Arabidopsis lyrata
AL5G11430 5.0kb downstream 5.0kb downstream 6645   true scaffold_5: 756675-763319 Arabidopsis lyrata
AL5G11430 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 756675-761674 Arabidopsis lyrata
AL5G11430 10.0kb upstream 10.0kb upstream 11645   true scaffold_5: 761675-773319 Arabidopsis lyrata
AL5G11430 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 763320-773319 Arabidopsis lyrata
AL5G11430 10.0kb downstream 10.0kb downstream 11645   true scaffold_5: 751675-763319 Arabidopsis lyrata
AL5G11430 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 751675-761674 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121492550 5273 Angiosperm View MSA
122327381 5261 Brassicaceae View MSA
123768815 5264 Brassicales-Malvales View MSA
124267396 5266 SBM View MSA
124123721 5268 Malvidae View MSA
123852835 5270 Rosid View MSA
123438951 5271 Pentapetalae View MSA
122474551 5272 Eudicot View MSA
120765928 5274 Embryophyte View MSA
122808342 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain