Gene : AL5G11770 A. lyrata v2.1

Defline:  (1 of 1) 2.7.7.60 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / MEP cytidylyltransferase Genomic Order:  162
Name:  ? AL5G11770 Secondary Identifier:  ? PAC:35918435

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7560 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G11770 0.5kb upstream 0.5kb upstream 2901   true scaffold_5: 910362-913262 Arabidopsis lyrata
AL5G11770 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 912763-913262 Arabidopsis lyrata
AL5G11770 0.5kb downstream 0.5kb downstream 2901   true scaffold_5: 909862-912762 Arabidopsis lyrata
AL5G11770 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 909862-910361 Arabidopsis lyrata
AL5G11770 1.0kb upstream 1.0kb upstream 3401   true scaffold_5: 910362-913762 Arabidopsis lyrata
AL5G11770 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 912763-913762 Arabidopsis lyrata
AL5G11770 1.0kb downstream 1.0kb downstream 3401   true scaffold_5: 909362-912762 Arabidopsis lyrata
AL5G11770 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 909362-910361 Arabidopsis lyrata
AL5G11770 2.0kb upstream 2.0kb upstream 4401   true scaffold_5: 910362-914762 Arabidopsis lyrata
AL5G11770 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 912763-914762 Arabidopsis lyrata
AL5G11770 2.0kb downstream 2.0kb downstream 4401   true scaffold_5: 908362-912762 Arabidopsis lyrata
AL5G11770 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 908362-910361 Arabidopsis lyrata
AL5G11770 5.0kb upstream 5.0kb upstream 7401   true scaffold_5: 910362-917762 Arabidopsis lyrata
AL5G11770 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 912763-917762 Arabidopsis lyrata
AL5G11770 5.0kb downstream 5.0kb downstream 7401   true scaffold_5: 905362-912762 Arabidopsis lyrata
AL5G11770 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 905362-910361 Arabidopsis lyrata
AL5G11770 10.0kb upstream 10.0kb upstream 12401   true scaffold_5: 910362-922762 Arabidopsis lyrata
AL5G11770 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 912763-922762 Arabidopsis lyrata
AL5G11770 10.0kb downstream 10.0kb downstream 12401   true scaffold_5: 900362-912762 Arabidopsis lyrata
AL5G11770 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 900362-910361 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361026 5261 Brassicaceae View MSA
123834534 5264 Brassicales-Malvales View MSA
124338022 5266 SBM View MSA
124240057 5268 Malvidae View MSA
124060576 5270 Rosid View MSA
123739794 5271 Pentapetalae View MSA
122786593 5272 Eudicot View MSA
122044265 5273 Angiosperm View MSA
121344499 5274 Embryophyte View MSA
123424809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain