Gene : AL5G11500 A. lyrata v2.1
Defline:  (1 of 10) PTHR32278:SF6 - F-BOX PROTEIN PP2-B1-RELATED Genomic Order:  138
Name:  ? AL5G11500 Secondary Identifier:  ? PAC:35919964
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G11500 0.5kb upstream 0.5kb upstream 1873   true scaffold_5: 792077-793949 Arabidopsis lyrata
AL5G11500 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 793450-793949 Arabidopsis lyrata
AL5G11500 0.5kb downstream 0.5kb downstream 1873   true scaffold_5: 791577-793449 Arabidopsis lyrata
AL5G11500 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 791577-792076 Arabidopsis lyrata
AL5G11500 1.0kb upstream 1.0kb upstream 2373   true scaffold_5: 792077-794449 Arabidopsis lyrata
AL5G11500 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 793450-794449 Arabidopsis lyrata
AL5G11500 1.0kb downstream 1.0kb downstream 2373   true scaffold_5: 791077-793449 Arabidopsis lyrata
AL5G11500 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 791077-792076 Arabidopsis lyrata
AL5G11500 2.0kb upstream 2.0kb upstream 3373   true scaffold_5: 792077-795449 Arabidopsis lyrata
AL5G11500 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 793450-795449 Arabidopsis lyrata
AL5G11500 2.0kb downstream 2.0kb downstream 3373   true scaffold_5: 790077-793449 Arabidopsis lyrata
AL5G11500 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 790077-792076 Arabidopsis lyrata
AL5G11500 5.0kb upstream 5.0kb upstream 6373   true scaffold_5: 792077-798449 Arabidopsis lyrata
AL5G11500 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 793450-798449 Arabidopsis lyrata
AL5G11500 5.0kb downstream 5.0kb downstream 6373   true scaffold_5: 787077-793449 Arabidopsis lyrata
AL5G11500 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 787077-792076 Arabidopsis lyrata
AL5G11500 10.0kb upstream 10.0kb upstream 11373   true scaffold_5: 792077-803449 Arabidopsis lyrata
AL5G11500 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 793450-803449 Arabidopsis lyrata
AL5G11500 10.0kb downstream 10.0kb downstream 11373   true scaffold_5: 782077-793449 Arabidopsis lyrata
AL5G11500 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 782077-792076 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374912 5261 Brassicaceae View MSA
123839830 5264 Brassicales-Malvales View MSA
124344863 5266 SBM View MSA
124251424 5268 Malvidae View MSA
124073943 5270 Rosid View MSA
123752990 5271 Pentapetalae View MSA
122797907 5272 Eudicot View MSA
122050927 5273 Angiosperm View MSA
121349666 5274 Embryophyte View MSA
123381391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain