Gene : AL5G11560 A. lyrata v2.1

Defline:  (1 of 10) PTHR32278:SF6 - F-BOX PROTEIN PP2-B1-RELATED Genomic Order:  142
Name:  ? AL5G11560 Secondary Identifier:  ? PAC:35919157

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G11560 0.5kb upstream 0.5kb upstream 1869   true scaffold_5: 812551-814419 Arabidopsis lyrata
AL5G11560 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 813920-814419 Arabidopsis lyrata
AL5G11560 0.5kb downstream 0.5kb downstream 1869   true scaffold_5: 812051-813919 Arabidopsis lyrata
AL5G11560 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 812051-812550 Arabidopsis lyrata
AL5G11560 1.0kb upstream 1.0kb upstream 2369   true scaffold_5: 812551-814919 Arabidopsis lyrata
AL5G11560 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 813920-814919 Arabidopsis lyrata
AL5G11560 1.0kb downstream 1.0kb downstream 2369   true scaffold_5: 811551-813919 Arabidopsis lyrata
AL5G11560 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 811551-812550 Arabidopsis lyrata
AL5G11560 2.0kb upstream 2.0kb upstream 3369   true scaffold_5: 812551-815919 Arabidopsis lyrata
AL5G11560 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 813920-815919 Arabidopsis lyrata
AL5G11560 2.0kb downstream 2.0kb downstream 3369   true scaffold_5: 810551-813919 Arabidopsis lyrata
AL5G11560 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 810551-812550 Arabidopsis lyrata
AL5G11560 5.0kb upstream 5.0kb upstream 6369   true scaffold_5: 812551-818919 Arabidopsis lyrata
AL5G11560 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 813920-818919 Arabidopsis lyrata
AL5G11560 5.0kb downstream 5.0kb downstream 6369   true scaffold_5: 807551-813919 Arabidopsis lyrata
AL5G11560 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 807551-812550 Arabidopsis lyrata
AL5G11560 10.0kb upstream 10.0kb upstream 11369   true scaffold_5: 812551-823919 Arabidopsis lyrata
AL5G11560 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 813920-823919 Arabidopsis lyrata
AL5G11560 10.0kb downstream 10.0kb downstream 11369   true scaffold_5: 802551-813919 Arabidopsis lyrata
AL5G11560 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 802551-812550 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338228 5261 Brassicaceae View MSA
123778834 5264 Brassicales-Malvales View MSA
124349755 5266 SBM View MSA
124251424 5268 Malvidae View MSA
124073943 5270 Rosid View MSA
123752990 5271 Pentapetalae View MSA
122797907 5272 Eudicot View MSA
122050927 5273 Angiosperm View MSA
121349666 5274 Embryophyte View MSA
123381391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain