Gene : AL5G16190 A. lyrata v2.1

Defline:  (1 of 3) 1.17.4.2 - Ribonucleoside-triphosphate reductase / Ribonucleotide reductase Genomic Order:  546
Name:  ? AL5G16190 Secondary Identifier:  ? PAC:35919892

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6126 Arabidopsis lyrata pathologic  
Alyrata PWY-6545 Arabidopsis lyrata pathologic  
Alyrata PWY-7184 Arabidopsis lyrata pathologic  
Alyrata PWY-7210 Arabidopsis lyrata pathologic  
Alyrata PWY-7211 Arabidopsis lyrata pathologic  
Alyrata PWY-7220 Arabidopsis lyrata pathologic  
Alyrata PWY-7222 Arabidopsis lyrata pathologic  
Alyrata PWY-7226 Arabidopsis lyrata pathologic  
Alyrata PWY-7227 Arabidopsis lyrata pathologic  
Alyrata PWY-7228 Arabidopsis lyrata pathologic  
Alyrata PWY-7229 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G16190 0.5kb upstream 0.5kb upstream 1829   true scaffold_5: 3396594-3398422 Arabidopsis lyrata
AL5G16190 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 3397923-3398422 Arabidopsis lyrata
AL5G16190 0.5kb downstream 0.5kb downstream 1829   true scaffold_5: 3396094-3397922 Arabidopsis lyrata
AL5G16190 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 3396094-3396593 Arabidopsis lyrata
AL5G16190 1.0kb upstream 1.0kb upstream 2329   true scaffold_5: 3396594-3398922 Arabidopsis lyrata
AL5G16190 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 3397923-3398922 Arabidopsis lyrata
AL5G16190 1.0kb downstream 1.0kb downstream 2329   true scaffold_5: 3395594-3397922 Arabidopsis lyrata
AL5G16190 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 3395594-3396593 Arabidopsis lyrata
AL5G16190 2.0kb upstream 2.0kb upstream 3329   true scaffold_5: 3396594-3399922 Arabidopsis lyrata
AL5G16190 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 3397923-3399922 Arabidopsis lyrata
AL5G16190 2.0kb downstream 2.0kb downstream 3329   true scaffold_5: 3394594-3397922 Arabidopsis lyrata
AL5G16190 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 3394594-3396593 Arabidopsis lyrata
AL5G16190 5.0kb upstream 5.0kb upstream 6329   true scaffold_5: 3396594-3402922 Arabidopsis lyrata
AL5G16190 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 3397923-3402922 Arabidopsis lyrata
AL5G16190 5.0kb downstream 5.0kb downstream 6329   true scaffold_5: 3391594-3397922 Arabidopsis lyrata
AL5G16190 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 3391594-3396593 Arabidopsis lyrata
AL5G16190 10.0kb upstream 10.0kb upstream 11329   true scaffold_5: 3396594-3407922 Arabidopsis lyrata
AL5G16190 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 3397923-3407922 Arabidopsis lyrata
AL5G16190 10.0kb downstream 10.0kb downstream 11329   true scaffold_5: 3386594-3397922 Arabidopsis lyrata
AL5G16190 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 3386594-3396593 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360169 5261 Brassicaceae View MSA
123832091 5264 Brassicales-Malvales View MSA
124342160 5266 SBM View MSA
124244448 5268 Malvidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain