Gene : AL5G15580 A. lyrata v2.1
Defline:  (1 of 1) KOG2164 - Predicted E3 ubiquitin ligase Genomic Order:  498
Name:  ? AL5G15580 Secondary Identifier:  ? PAC:35921003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G15580 0.5kb upstream 0.5kb upstream 4278   true scaffold_5: 3053352-3057629 Arabidopsis lyrata
AL5G15580 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 3053352-3053851 Arabidopsis lyrata
AL5G15580 0.5kb downstream 0.5kb downstream 4278   true scaffold_5: 3053852-3058129 Arabidopsis lyrata
AL5G15580 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 3057630-3058129 Arabidopsis lyrata
AL5G15580 1.0kb upstream 1.0kb upstream 4778   true scaffold_5: 3052852-3057629 Arabidopsis lyrata
AL5G15580 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 3052852-3053851 Arabidopsis lyrata
AL5G15580 1.0kb downstream 1.0kb downstream 4778   true scaffold_5: 3053852-3058629 Arabidopsis lyrata
AL5G15580 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 3057630-3058629 Arabidopsis lyrata
AL5G15580 2.0kb upstream 2.0kb upstream 5778   true scaffold_5: 3051852-3057629 Arabidopsis lyrata
AL5G15580 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 3051852-3053851 Arabidopsis lyrata
AL5G15580 2.0kb downstream 2.0kb downstream 5778   true scaffold_5: 3053852-3059629 Arabidopsis lyrata
AL5G15580 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 3057630-3059629 Arabidopsis lyrata
AL5G15580 5.0kb upstream 5.0kb upstream 8778   true scaffold_5: 3048852-3057629 Arabidopsis lyrata
AL5G15580 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 3048852-3053851 Arabidopsis lyrata
AL5G15580 5.0kb downstream 5.0kb downstream 8778   true scaffold_5: 3053852-3062629 Arabidopsis lyrata
AL5G15580 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 3057630-3062629 Arabidopsis lyrata
AL5G15580 10.0kb upstream 10.0kb upstream 13778   true scaffold_5: 3043852-3057629 Arabidopsis lyrata
AL5G15580 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 3043852-3053851 Arabidopsis lyrata
AL5G15580 10.0kb downstream 10.0kb downstream 13778   true scaffold_5: 3053852-3067629 Arabidopsis lyrata
AL5G15580 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 3057630-3067629 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370607 5261 Brassicaceae View MSA
123837809 5264 Brassicales-Malvales View MSA
124341668 5266 SBM View MSA
124243095 5268 Malvidae View MSA
124060786 5270 Rosid View MSA
123742061 5271 Pentapetalae View MSA
122793495 5272 Eudicot View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain