Gene : AL5G15150 A. lyrata v2.1

Defline:  (1 of 1) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  463
Name:  ? AL5G15150 Secondary Identifier:  ? PAC:35918884

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1301 Arabidopsis lyrata pathologic  
Alyrata PWY-6527 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G15150 0.5kb upstream 0.5kb upstream 3734   true scaffold_5: 2801954-2805687 Arabidopsis lyrata
AL5G15150 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 2801954-2802453 Arabidopsis lyrata
AL5G15150 0.5kb downstream 0.5kb downstream 3734   true scaffold_5: 2802454-2806187 Arabidopsis lyrata
AL5G15150 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 2805688-2806187 Arabidopsis lyrata
AL5G15150 1.0kb upstream 1.0kb upstream 4234   true scaffold_5: 2801454-2805687 Arabidopsis lyrata
AL5G15150 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 2801454-2802453 Arabidopsis lyrata
AL5G15150 1.0kb downstream 1.0kb downstream 4234   true scaffold_5: 2802454-2806687 Arabidopsis lyrata
AL5G15150 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 2805688-2806687 Arabidopsis lyrata
AL5G15150 2.0kb upstream 2.0kb upstream 5234   true scaffold_5: 2800454-2805687 Arabidopsis lyrata
AL5G15150 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 2800454-2802453 Arabidopsis lyrata
AL5G15150 2.0kb downstream 2.0kb downstream 5234   true scaffold_5: 2802454-2807687 Arabidopsis lyrata
AL5G15150 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 2805688-2807687 Arabidopsis lyrata
AL5G15150 5.0kb upstream 5.0kb upstream 8234   true scaffold_5: 2797454-2805687 Arabidopsis lyrata
AL5G15150 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 2797454-2802453 Arabidopsis lyrata
AL5G15150 5.0kb downstream 5.0kb downstream 8234   true scaffold_5: 2802454-2810687 Arabidopsis lyrata
AL5G15150 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 2805688-2810687 Arabidopsis lyrata
AL5G15150 10.0kb upstream 10.0kb upstream 13234   true scaffold_5: 2792454-2805687 Arabidopsis lyrata
AL5G15150 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 2792454-2802453 Arabidopsis lyrata
AL5G15150 10.0kb downstream 10.0kb downstream 13234   true scaffold_5: 2802454-2815687 Arabidopsis lyrata
AL5G15150 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 2805688-2815687 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364962 5261 Brassicaceae View MSA
123827886 5264 Brassicales-Malvales View MSA
124343227 5266 SBM View MSA
124238425 5268 Malvidae View MSA
124064341 5270 Rosid View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain