Gene : AL5G15180 A. lyrata v2.1

Defline:  (1 of 1) 2.1.1.214 - tRNA (guanine(10)-N(2))-methyltransferase Genomic Order:  466
Name:  ? AL5G15180 Secondary Identifier:  ? PAC:35918858

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6829 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G15180 0.5kb upstream 0.5kb upstream 2446   true scaffold_5: 2814384-2816829 Arabidopsis lyrata
AL5G15180 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 2816330-2816829 Arabidopsis lyrata
AL5G15180 0.5kb downstream 0.5kb downstream 2446   true scaffold_5: 2813884-2816329 Arabidopsis lyrata
AL5G15180 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 2813884-2814383 Arabidopsis lyrata
AL5G15180 1.0kb upstream 1.0kb upstream 2946   true scaffold_5: 2814384-2817329 Arabidopsis lyrata
AL5G15180 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 2816330-2817329 Arabidopsis lyrata
AL5G15180 1.0kb downstream 1.0kb downstream 2946   true scaffold_5: 2813384-2816329 Arabidopsis lyrata
AL5G15180 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 2813384-2814383 Arabidopsis lyrata
AL5G15180 2.0kb upstream 2.0kb upstream 3946   true scaffold_5: 2814384-2818329 Arabidopsis lyrata
AL5G15180 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 2816330-2818329 Arabidopsis lyrata
AL5G15180 2.0kb downstream 2.0kb downstream 3946   true scaffold_5: 2812384-2816329 Arabidopsis lyrata
AL5G15180 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 2812384-2814383 Arabidopsis lyrata
AL5G15180 5.0kb upstream 5.0kb upstream 6946   true scaffold_5: 2814384-2821329 Arabidopsis lyrata
AL5G15180 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 2816330-2821329 Arabidopsis lyrata
AL5G15180 5.0kb downstream 5.0kb downstream 6946   true scaffold_5: 2809384-2816329 Arabidopsis lyrata
AL5G15180 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 2809384-2814383 Arabidopsis lyrata
AL5G15180 10.0kb upstream 10.0kb upstream 11946   true scaffold_5: 2814384-2826329 Arabidopsis lyrata
AL5G15180 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 2816330-2826329 Arabidopsis lyrata
AL5G15180 10.0kb downstream 10.0kb downstream 11946   true scaffold_5: 2804384-2816329 Arabidopsis lyrata
AL5G15180 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 2804384-2814383 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366323 5261 Brassicaceae View MSA
123829804 5264 Brassicales-Malvales View MSA
124342748 5266 SBM View MSA
124252860 5268 Malvidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain