Gene : AL5G14340 A. lyrata v2.1

Defline:  (1 of 4) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  386
Name:  ? AL5G14340 Secondary Identifier:  ? PAC:35921335

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-735 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G14340 0.5kb upstream 0.5kb upstream 1695   true scaffold_5: 2437701-2439395 Arabidopsis lyrata
AL5G14340 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 2437701-2438200 Arabidopsis lyrata
AL5G14340 0.5kb downstream 0.5kb downstream 1695   true scaffold_5: 2438201-2439895 Arabidopsis lyrata
AL5G14340 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 2439396-2439895 Arabidopsis lyrata
AL5G14340 1.0kb upstream 1.0kb upstream 2195   true scaffold_5: 2437201-2439395 Arabidopsis lyrata
AL5G14340 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 2437201-2438200 Arabidopsis lyrata
AL5G14340 1.0kb downstream 1.0kb downstream 2195   true scaffold_5: 2438201-2440395 Arabidopsis lyrata
AL5G14340 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 2439396-2440395 Arabidopsis lyrata
AL5G14340 2.0kb upstream 2.0kb upstream 3195   true scaffold_5: 2436201-2439395 Arabidopsis lyrata
AL5G14340 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 2436201-2438200 Arabidopsis lyrata
AL5G14340 2.0kb downstream 2.0kb downstream 3195   true scaffold_5: 2438201-2441395 Arabidopsis lyrata
AL5G14340 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 2439396-2441395 Arabidopsis lyrata
AL5G14340 5.0kb upstream 5.0kb upstream 6195   true scaffold_5: 2433201-2439395 Arabidopsis lyrata
AL5G14340 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 2433201-2438200 Arabidopsis lyrata
AL5G14340 5.0kb downstream 5.0kb downstream 6195   true scaffold_5: 2438201-2444395 Arabidopsis lyrata
AL5G14340 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 2439396-2444395 Arabidopsis lyrata
AL5G14340 10.0kb upstream 10.0kb upstream 11195   true scaffold_5: 2428201-2439395 Arabidopsis lyrata
AL5G14340 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 2428201-2438200 Arabidopsis lyrata
AL5G14340 10.0kb downstream 10.0kb downstream 11195   true scaffold_5: 2438201-2449395 Arabidopsis lyrata
AL5G14340 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 2439396-2449395 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380757 5261 Brassicaceae View MSA
123802886 5264 Brassicales-Malvales View MSA
124348602 5266 SBM View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain