Gene : AL5G19840 A. lyrata v2.1
Defline:  (1 of 3) K14972 - PAX-interacting protein 1 (PAXIP1, PTIP) Genomic Order:  852
Name:  ? AL5G19840 Secondary Identifier:  ? PAC:35919812
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G19840 0.5kb upstream 0.5kb upstream 5976   true scaffold_5: 6221367-6227342 Arabidopsis lyrata
AL5G19840 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 6226843-6227342 Arabidopsis lyrata
AL5G19840 0.5kb downstream 0.5kb downstream 5976   true scaffold_5: 6220867-6226842 Arabidopsis lyrata
AL5G19840 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 6220867-6221366 Arabidopsis lyrata
AL5G19840 1.0kb upstream 1.0kb upstream 6476   true scaffold_5: 6221367-6227842 Arabidopsis lyrata
AL5G19840 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 6226843-6227842 Arabidopsis lyrata
AL5G19840 1.0kb downstream 1.0kb downstream 6476   true scaffold_5: 6220367-6226842 Arabidopsis lyrata
AL5G19840 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 6220367-6221366 Arabidopsis lyrata
AL5G19840 2.0kb upstream 2.0kb upstream 7476   true scaffold_5: 6221367-6228842 Arabidopsis lyrata
AL5G19840 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 6226843-6228842 Arabidopsis lyrata
AL5G19840 2.0kb downstream 2.0kb downstream 7476   true scaffold_5: 6219367-6226842 Arabidopsis lyrata
AL5G19840 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 6219367-6221366 Arabidopsis lyrata
AL5G19840 5.0kb upstream 5.0kb upstream 10476   true scaffold_5: 6221367-6231842 Arabidopsis lyrata
AL5G19840 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 6226843-6231842 Arabidopsis lyrata
AL5G19840 5.0kb downstream 5.0kb downstream 10476   true scaffold_5: 6216367-6226842 Arabidopsis lyrata
AL5G19840 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 6216367-6221366 Arabidopsis lyrata
AL5G19840 10.0kb upstream 10.0kb upstream 15476   true scaffold_5: 6221367-6236842 Arabidopsis lyrata
AL5G19840 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 6226843-6236842 Arabidopsis lyrata
AL5G19840 10.0kb downstream 10.0kb downstream 15476   true scaffold_5: 6211367-6226842 Arabidopsis lyrata
AL5G19840 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 6211367-6221366 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364027 5261 Brassicaceae View MSA
123798669 5264 Brassicales-Malvales View MSA
124296276 5266 SBM View MSA
124148478 5268 Malvidae View MSA
124039086 5270 Rosid View MSA
123752539 5271 Pentapetalae View MSA
122797451 5272 Eudicot View MSA
122048270 5273 Angiosperm View MSA
121350628 5274 Embryophyte View MSA
123381823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain