Gene : AL5G17980 A. lyrata v2.1
Defline:  (1 of 1) PF11802 - Centromere-associated protein K (CENP-K) Genomic Order:  699
Name:  ? AL5G17980 Secondary Identifier:  ? PAC:35920808
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G17980 0.5kb upstream 0.5kb upstream 3016   true scaffold_5: 4597074-4600089 Arabidopsis lyrata
AL5G17980 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 4597074-4597573 Arabidopsis lyrata
AL5G17980 0.5kb downstream 0.5kb downstream 3016   true scaffold_5: 4597574-4600589 Arabidopsis lyrata
AL5G17980 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 4600090-4600589 Arabidopsis lyrata
AL5G17980 1.0kb upstream 1.0kb upstream 3516   true scaffold_5: 4596574-4600089 Arabidopsis lyrata
AL5G17980 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 4596574-4597573 Arabidopsis lyrata
AL5G17980 1.0kb downstream 1.0kb downstream 3516   true scaffold_5: 4597574-4601089 Arabidopsis lyrata
AL5G17980 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 4600090-4601089 Arabidopsis lyrata
AL5G17980 2.0kb upstream 2.0kb upstream 4516   true scaffold_5: 4595574-4600089 Arabidopsis lyrata
AL5G17980 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 4595574-4597573 Arabidopsis lyrata
AL5G17980 2.0kb downstream 2.0kb downstream 4516   true scaffold_5: 4597574-4602089 Arabidopsis lyrata
AL5G17980 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 4600090-4602089 Arabidopsis lyrata
AL5G17980 5.0kb upstream 5.0kb upstream 7516   true scaffold_5: 4592574-4600089 Arabidopsis lyrata
AL5G17980 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 4592574-4597573 Arabidopsis lyrata
AL5G17980 5.0kb downstream 5.0kb downstream 7516   true scaffold_5: 4597574-4605089 Arabidopsis lyrata
AL5G17980 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 4600090-4605089 Arabidopsis lyrata
AL5G17980 10.0kb upstream 10.0kb upstream 12516   true scaffold_5: 4587574-4600089 Arabidopsis lyrata
AL5G17980 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 4587574-4597573 Arabidopsis lyrata
AL5G17980 10.0kb downstream 10.0kb downstream 12516   true scaffold_5: 4597574-4610089 Arabidopsis lyrata
AL5G17980 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 4600090-4610089 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026351 5273 Angiosperm View MSA
122372495 5261 Brassicaceae View MSA
123836791 5264 Brassicales-Malvales View MSA
124342357 5266 SBM View MSA
124243134 5268 Malvidae View MSA
124037199 5270 Rosid View MSA
123745496 5271 Pentapetalae View MSA
122786734 5272 Eudicot View MSA
121296290 5274 Embryophyte View MSA
123334480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain