Gene : AL5G16940 A. lyrata v2.1

Genomic Order:  612 Name:  ? AL5G16940
Secondary Identifier:  ? PAC:35919476

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G16940 0.5kb upstream 0.5kb upstream 1612   true scaffold_5: 3892730-3894341 Arabidopsis lyrata
AL5G16940 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 3892730-3893229 Arabidopsis lyrata
AL5G16940 0.5kb downstream 0.5kb downstream 1612   true scaffold_5: 3893230-3894841 Arabidopsis lyrata
AL5G16940 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 3894342-3894841 Arabidopsis lyrata
AL5G16940 1.0kb upstream 1.0kb upstream 2112   true scaffold_5: 3892230-3894341 Arabidopsis lyrata
AL5G16940 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 3892230-3893229 Arabidopsis lyrata
AL5G16940 1.0kb downstream 1.0kb downstream 2112   true scaffold_5: 3893230-3895341 Arabidopsis lyrata
AL5G16940 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 3894342-3895341 Arabidopsis lyrata
AL5G16940 2.0kb upstream 2.0kb upstream 3112   true scaffold_5: 3891230-3894341 Arabidopsis lyrata
AL5G16940 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 3891230-3893229 Arabidopsis lyrata
AL5G16940 2.0kb downstream 2.0kb downstream 3112   true scaffold_5: 3893230-3896341 Arabidopsis lyrata
AL5G16940 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 3894342-3896341 Arabidopsis lyrata
AL5G16940 5.0kb upstream 5.0kb upstream 6112   true scaffold_5: 3888230-3894341 Arabidopsis lyrata
AL5G16940 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 3888230-3893229 Arabidopsis lyrata
AL5G16940 5.0kb downstream 5.0kb downstream 6112   true scaffold_5: 3893230-3899341 Arabidopsis lyrata
AL5G16940 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 3894342-3899341 Arabidopsis lyrata
AL5G16940 10.0kb upstream 10.0kb upstream 11112   true scaffold_5: 3883230-3894341 Arabidopsis lyrata
AL5G16940 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 3883230-3893229 Arabidopsis lyrata
AL5G16940 10.0kb downstream 10.0kb downstream 11112   true scaffold_5: 3893230-3904341 Arabidopsis lyrata
AL5G16940 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 3894342-3904341 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365688 5261 Brassicaceae View MSA
123840270 5264 Brassicales-Malvales View MSA
124339639 5266 SBM View MSA
124239820 5268 Malvidae View MSA
124060553 5270 Rosid View MSA
123741817 5271 Pentapetalae View MSA
122786659 5272 Eudicot View MSA
122043183 5273 Angiosperm View MSA
121310085 5274 Embryophyte View MSA
123347672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain