Gene : AL5G21490 A. lyrata v2.1

Defline:  (1 of 2) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  975
Name:  ? AL5G21490 Secondary Identifier:  ? PAC:35920911

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G21490 0.5kb upstream 0.5kb upstream 2455   true scaffold_5: 10240130-10242584 Arabidopsis lyrata
AL5G21490 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 10240130-10240629 Arabidopsis lyrata
AL5G21490 0.5kb downstream 0.5kb downstream 2455   true scaffold_5: 10240630-10243084 Arabidopsis lyrata
AL5G21490 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 10242585-10243084 Arabidopsis lyrata
AL5G21490 1.0kb upstream 1.0kb upstream 2955   true scaffold_5: 10239630-10242584 Arabidopsis lyrata
AL5G21490 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 10239630-10240629 Arabidopsis lyrata
AL5G21490 1.0kb downstream 1.0kb downstream 2955   true scaffold_5: 10240630-10243584 Arabidopsis lyrata
AL5G21490 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 10242585-10243584 Arabidopsis lyrata
AL5G21490 2.0kb upstream 2.0kb upstream 3955   true scaffold_5: 10238630-10242584 Arabidopsis lyrata
AL5G21490 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 10238630-10240629 Arabidopsis lyrata
AL5G21490 2.0kb downstream 2.0kb downstream 3955   true scaffold_5: 10240630-10244584 Arabidopsis lyrata
AL5G21490 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 10242585-10244584 Arabidopsis lyrata
AL5G21490 5.0kb upstream 5.0kb upstream 6955   true scaffold_5: 10235630-10242584 Arabidopsis lyrata
AL5G21490 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 10235630-10240629 Arabidopsis lyrata
AL5G21490 5.0kb downstream 5.0kb downstream 6955   true scaffold_5: 10240630-10247584 Arabidopsis lyrata
AL5G21490 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 10242585-10247584 Arabidopsis lyrata
AL5G21490 10.0kb upstream 10.0kb upstream 11955   true scaffold_5: 10230630-10242584 Arabidopsis lyrata
AL5G21490 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 10230630-10240629 Arabidopsis lyrata
AL5G21490 10.0kb downstream 10.0kb downstream 11955   true scaffold_5: 10240630-10252584 Arabidopsis lyrata
AL5G21490 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 10242585-10252584 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366695 5261 Brassicaceae View MSA
123839267 5264 Brassicales-Malvales View MSA
124343542 5266 SBM View MSA
124238887 5268 Malvidae View MSA
124067619 5270 Rosid View MSA
123736820 5271 Pentapetalae View MSA
122786957 5272 Eudicot View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain