Gene : AL5G21020 A. lyrata v2.1
Defline:  (1 of 36) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  934
Name:  ? AL5G21020 Secondary Identifier:  ? PAC:35918467
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G21020 0.5kb upstream 0.5kb upstream 4095   true scaffold_5: 9795728-9799822 Arabidopsis lyrata
AL5G21020 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 9799323-9799822 Arabidopsis lyrata
AL5G21020 0.5kb downstream 0.5kb downstream 4095   true scaffold_5: 9795228-9799322 Arabidopsis lyrata
AL5G21020 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 9795228-9795727 Arabidopsis lyrata
AL5G21020 1.0kb upstream 1.0kb upstream 4595   true scaffold_5: 9795728-9800322 Arabidopsis lyrata
AL5G21020 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 9799323-9800322 Arabidopsis lyrata
AL5G21020 1.0kb downstream 1.0kb downstream 4595   true scaffold_5: 9794728-9799322 Arabidopsis lyrata
AL5G21020 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 9794728-9795727 Arabidopsis lyrata
AL5G21020 2.0kb upstream 2.0kb upstream 5595   true scaffold_5: 9795728-9801322 Arabidopsis lyrata
AL5G21020 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 9799323-9801322 Arabidopsis lyrata
AL5G21020 2.0kb downstream 2.0kb downstream 5595   true scaffold_5: 9793728-9799322 Arabidopsis lyrata
AL5G21020 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 9793728-9795727 Arabidopsis lyrata
AL5G21020 5.0kb upstream 5.0kb upstream 8595   true scaffold_5: 9795728-9804322 Arabidopsis lyrata
AL5G21020 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 9799323-9804322 Arabidopsis lyrata
AL5G21020 5.0kb downstream 5.0kb downstream 8595   true scaffold_5: 9790728-9799322 Arabidopsis lyrata
AL5G21020 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 9790728-9795727 Arabidopsis lyrata
AL5G21020 10.0kb upstream 10.0kb upstream 13595   true scaffold_5: 9795728-9809322 Arabidopsis lyrata
AL5G21020 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 9799323-9809322 Arabidopsis lyrata
AL5G21020 10.0kb downstream 10.0kb downstream 13595   true scaffold_5: 9785728-9799322 Arabidopsis lyrata
AL5G21020 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 9785728-9795727 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026431 5273 Angiosperm View MSA
122367516 5261 Brassicaceae View MSA
123799375 5264 Brassicales-Malvales View MSA
124296901 5266 SBM View MSA
124249654 5268 Malvidae View MSA
124066643 5270 Rosid View MSA
123751274 5271 Pentapetalae View MSA
122794411 5272 Eudicot View MSA
121348629 5274 Embryophyte View MSA
123380947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain