Gene : AL5G26300 A. lyrata v2.1
Defline:  (1 of 3) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Genomic Order:  1392
Name:  ? AL5G26300 Secondary Identifier:  ? PAC:35921168
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G26300 0.5kb upstream 0.5kb upstream 4585   true scaffold_5: 13047352-13051936 Arabidopsis lyrata
AL5G26300 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13047352-13047851 Arabidopsis lyrata
AL5G26300 0.5kb downstream 0.5kb downstream 4585   true scaffold_5: 13047852-13052436 Arabidopsis lyrata
AL5G26300 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13051937-13052436 Arabidopsis lyrata
AL5G26300 1.0kb upstream 1.0kb upstream 5085   true scaffold_5: 13046852-13051936 Arabidopsis lyrata
AL5G26300 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13046852-13047851 Arabidopsis lyrata
AL5G26300 1.0kb downstream 1.0kb downstream 5085   true scaffold_5: 13047852-13052936 Arabidopsis lyrata
AL5G26300 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13051937-13052936 Arabidopsis lyrata
AL5G26300 2.0kb upstream 2.0kb upstream 6085   true scaffold_5: 13045852-13051936 Arabidopsis lyrata
AL5G26300 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13045852-13047851 Arabidopsis lyrata
AL5G26300 2.0kb downstream 2.0kb downstream 6085   true scaffold_5: 13047852-13053936 Arabidopsis lyrata
AL5G26300 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13051937-13053936 Arabidopsis lyrata
AL5G26300 5.0kb upstream 5.0kb upstream 9085   true scaffold_5: 13042852-13051936 Arabidopsis lyrata
AL5G26300 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13042852-13047851 Arabidopsis lyrata
AL5G26300 5.0kb downstream 5.0kb downstream 9085   true scaffold_5: 13047852-13056936 Arabidopsis lyrata
AL5G26300 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13051937-13056936 Arabidopsis lyrata
AL5G26300 10.0kb upstream 10.0kb upstream 14085   true scaffold_5: 13037852-13051936 Arabidopsis lyrata
AL5G26300 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13037852-13047851 Arabidopsis lyrata
AL5G26300 10.0kb downstream 10.0kb downstream 14085   true scaffold_5: 13047852-13061936 Arabidopsis lyrata
AL5G26300 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13051937-13061936 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122366481 5261 Brassicaceae View MSA
123835183 5264 Brassicales-Malvales View MSA
124351521 5266 SBM View MSA
124242131 5268 Malvidae View MSA
124063114 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain