Gene : AL5G28790 A. lyrata v2.1
Defline:  (1 of 4) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  1623
Name:  ? AL5G28790 Secondary Identifier:  ? PAC:35919147
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G28790 0.5kb upstream 0.5kb upstream 2318   true scaffold_5: 14293844-14296161 Arabidopsis lyrata
AL5G28790 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 14295662-14296161 Arabidopsis lyrata
AL5G28790 0.5kb downstream 0.5kb downstream 2318   true scaffold_5: 14293344-14295661 Arabidopsis lyrata
AL5G28790 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 14293344-14293843 Arabidopsis lyrata
AL5G28790 1.0kb upstream 1.0kb upstream 2818   true scaffold_5: 14293844-14296661 Arabidopsis lyrata
AL5G28790 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 14295662-14296661 Arabidopsis lyrata
AL5G28790 1.0kb downstream 1.0kb downstream 2818   true scaffold_5: 14292844-14295661 Arabidopsis lyrata
AL5G28790 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 14292844-14293843 Arabidopsis lyrata
AL5G28790 2.0kb upstream 2.0kb upstream 3818   true scaffold_5: 14293844-14297661 Arabidopsis lyrata
AL5G28790 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 14295662-14297661 Arabidopsis lyrata
AL5G28790 2.0kb downstream 2.0kb downstream 3818   true scaffold_5: 14291844-14295661 Arabidopsis lyrata
AL5G28790 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 14291844-14293843 Arabidopsis lyrata
AL5G28790 5.0kb upstream 5.0kb upstream 6818   true scaffold_5: 14293844-14300661 Arabidopsis lyrata
AL5G28790 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 14295662-14300661 Arabidopsis lyrata
AL5G28790 5.0kb downstream 5.0kb downstream 6818   true scaffold_5: 14288844-14295661 Arabidopsis lyrata
AL5G28790 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 14288844-14293843 Arabidopsis lyrata
AL5G28790 10.0kb upstream 10.0kb upstream 11818   true scaffold_5: 14293844-14305661 Arabidopsis lyrata
AL5G28790 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 14295662-14305661 Arabidopsis lyrata
AL5G28790 10.0kb downstream 10.0kb downstream 11818   true scaffold_5: 14283844-14295661 Arabidopsis lyrata
AL5G28790 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 14283844-14293843 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327345 5261 Brassicaceae View MSA
123768779 5264 Brassicales-Malvales View MSA
124267360 5266 SBM View MSA
124123686 5268 Malvidae View MSA
123852801 5270 Rosid View MSA
123741710 5271 Pentapetalae View MSA
122789997 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain