Gene : AL5G28730 A. lyrata v2.1
Defline:  (1 of 4) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  1617
Name:  ? AL5G28730 Secondary Identifier:  ? PAC:35919116
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G28730 0.5kb upstream 0.5kb upstream 2767   true scaffold_5: 14209835-14212601 Arabidopsis lyrata
AL5G28730 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 14212102-14212601 Arabidopsis lyrata
AL5G28730 0.5kb downstream 0.5kb downstream 2767   true scaffold_5: 14209335-14212101 Arabidopsis lyrata
AL5G28730 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 14209335-14209834 Arabidopsis lyrata
AL5G28730 1.0kb upstream 1.0kb upstream 3267   true scaffold_5: 14209835-14213101 Arabidopsis lyrata
AL5G28730 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 14212102-14213101 Arabidopsis lyrata
AL5G28730 1.0kb downstream 1.0kb downstream 3267   true scaffold_5: 14208835-14212101 Arabidopsis lyrata
AL5G28730 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 14208835-14209834 Arabidopsis lyrata
AL5G28730 2.0kb upstream 2.0kb upstream 4267   true scaffold_5: 14209835-14214101 Arabidopsis lyrata
AL5G28730 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 14212102-14214101 Arabidopsis lyrata
AL5G28730 2.0kb downstream 2.0kb downstream 4267   true scaffold_5: 14207835-14212101 Arabidopsis lyrata
AL5G28730 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 14207835-14209834 Arabidopsis lyrata
AL5G28730 5.0kb upstream 5.0kb upstream 7267   true scaffold_5: 14209835-14217101 Arabidopsis lyrata
AL5G28730 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 14212102-14217101 Arabidopsis lyrata
AL5G28730 5.0kb downstream 5.0kb downstream 7267   true scaffold_5: 14204835-14212101 Arabidopsis lyrata
AL5G28730 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 14204835-14209834 Arabidopsis lyrata
AL5G28730 10.0kb upstream 10.0kb upstream 12267   true scaffold_5: 14209835-14222101 Arabidopsis lyrata
AL5G28730 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 14212102-14222101 Arabidopsis lyrata
AL5G28730 10.0kb downstream 10.0kb downstream 12267   true scaffold_5: 14199835-14212101 Arabidopsis lyrata
AL5G28730 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 14199835-14209834 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327345 5261 Brassicaceae View MSA
123768779 5264 Brassicales-Malvales View MSA
124267360 5266 SBM View MSA
124123686 5268 Malvidae View MSA
123852801 5270 Rosid View MSA
123741710 5271 Pentapetalae View MSA
122789997 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain