Gene : AL5G27980 A. lyrata v2.1
Defline:  (1 of 1) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  1550
Name:  ? AL5G27980 Secondary Identifier:  ? PAC:35920707
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G27980 0.5kb upstream 0.5kb upstream 2895   true scaffold_5: 13869335-13872229 Arabidopsis lyrata
AL5G27980 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13869335-13869834 Arabidopsis lyrata
AL5G27980 0.5kb downstream 0.5kb downstream 2895   true scaffold_5: 13869835-13872729 Arabidopsis lyrata
AL5G27980 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13872230-13872729 Arabidopsis lyrata
AL5G27980 1.0kb upstream 1.0kb upstream 3395   true scaffold_5: 13868835-13872229 Arabidopsis lyrata
AL5G27980 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13868835-13869834 Arabidopsis lyrata
AL5G27980 1.0kb downstream 1.0kb downstream 3395   true scaffold_5: 13869835-13873229 Arabidopsis lyrata
AL5G27980 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13872230-13873229 Arabidopsis lyrata
AL5G27980 2.0kb upstream 2.0kb upstream 4395   true scaffold_5: 13867835-13872229 Arabidopsis lyrata
AL5G27980 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13867835-13869834 Arabidopsis lyrata
AL5G27980 2.0kb downstream 2.0kb downstream 4395   true scaffold_5: 13869835-13874229 Arabidopsis lyrata
AL5G27980 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13872230-13874229 Arabidopsis lyrata
AL5G27980 5.0kb upstream 5.0kb upstream 7395   true scaffold_5: 13864835-13872229 Arabidopsis lyrata
AL5G27980 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13864835-13869834 Arabidopsis lyrata
AL5G27980 5.0kb downstream 5.0kb downstream 7395   true scaffold_5: 13869835-13877229 Arabidopsis lyrata
AL5G27980 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13872230-13877229 Arabidopsis lyrata
AL5G27980 10.0kb upstream 10.0kb upstream 12395   true scaffold_5: 13859835-13872229 Arabidopsis lyrata
AL5G27980 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13859835-13869834 Arabidopsis lyrata
AL5G27980 10.0kb downstream 10.0kb downstream 12395   true scaffold_5: 13869835-13882229 Arabidopsis lyrata
AL5G27980 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13872230-13882229 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369351 5261 Brassicaceae View MSA
123841404 5264 Brassicales-Malvales View MSA
124344720 5266 SBM View MSA
124239322 5268 Malvidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain