Gene : AL5G27230 A. lyrata v2.1
Defline:  (1 of 2) KOG1887 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  1478
Name:  ? AL5G27230 Secondary Identifier:  ? PAC:35921486
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G27230 0.5kb upstream 0.5kb upstream 7731   true scaffold_5: 13521351-13529081 Arabidopsis lyrata
AL5G27230 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13528582-13529081 Arabidopsis lyrata
AL5G27230 0.5kb downstream 0.5kb downstream 7731   true scaffold_5: 13520851-13528581 Arabidopsis lyrata
AL5G27230 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13520851-13521350 Arabidopsis lyrata
AL5G27230 1.0kb upstream 1.0kb upstream 8231   true scaffold_5: 13521351-13529581 Arabidopsis lyrata
AL5G27230 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13528582-13529581 Arabidopsis lyrata
AL5G27230 1.0kb downstream 1.0kb downstream 8231   true scaffold_5: 13520351-13528581 Arabidopsis lyrata
AL5G27230 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13520351-13521350 Arabidopsis lyrata
AL5G27230 2.0kb upstream 2.0kb upstream 9231   true scaffold_5: 13521351-13530581 Arabidopsis lyrata
AL5G27230 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13528582-13530581 Arabidopsis lyrata
AL5G27230 2.0kb downstream 2.0kb downstream 9231   true scaffold_5: 13519351-13528581 Arabidopsis lyrata
AL5G27230 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13519351-13521350 Arabidopsis lyrata
AL5G27230 5.0kb upstream 5.0kb upstream 12231   true scaffold_5: 13521351-13533581 Arabidopsis lyrata
AL5G27230 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13528582-13533581 Arabidopsis lyrata
AL5G27230 5.0kb downstream 5.0kb downstream 12231   true scaffold_5: 13516351-13528581 Arabidopsis lyrata
AL5G27230 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13516351-13521350 Arabidopsis lyrata
AL5G27230 10.0kb upstream 10.0kb upstream 17231   true scaffold_5: 13521351-13538581 Arabidopsis lyrata
AL5G27230 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13528582-13538581 Arabidopsis lyrata
AL5G27230 10.0kb downstream 10.0kb downstream 17231   true scaffold_5: 13511351-13528581 Arabidopsis lyrata
AL5G27230 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13511351-13521350 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376354 5261 Brassicaceae View MSA
123841591 5264 Brassicales-Malvales View MSA
124340866 5266 SBM View MSA
124252136 5268 Malvidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain