Gene : AL5G27360 A. lyrata v2.1
Defline:  (1 of 1) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  1490
Name:  ? AL5G27360 Secondary Identifier:  ? PAC:35918599
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G27360 0.5kb upstream 0.5kb upstream 1706   true scaffold_5: 13579856-13581561 Arabidopsis lyrata
AL5G27360 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13581062-13581561 Arabidopsis lyrata
AL5G27360 0.5kb downstream 0.5kb downstream 1706   true scaffold_5: 13579356-13581061 Arabidopsis lyrata
AL5G27360 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13579356-13579855 Arabidopsis lyrata
AL5G27360 1.0kb upstream 1.0kb upstream 2206   true scaffold_5: 13579856-13582061 Arabidopsis lyrata
AL5G27360 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13581062-13582061 Arabidopsis lyrata
AL5G27360 1.0kb downstream 1.0kb downstream 2206   true scaffold_5: 13578856-13581061 Arabidopsis lyrata
AL5G27360 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13578856-13579855 Arabidopsis lyrata
AL5G27360 2.0kb upstream 2.0kb upstream 3206   true scaffold_5: 13579856-13583061 Arabidopsis lyrata
AL5G27360 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13581062-13583061 Arabidopsis lyrata
AL5G27360 2.0kb downstream 2.0kb downstream 3206   true scaffold_5: 13577856-13581061 Arabidopsis lyrata
AL5G27360 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13577856-13579855 Arabidopsis lyrata
AL5G27360 5.0kb upstream 5.0kb upstream 6206   true scaffold_5: 13579856-13586061 Arabidopsis lyrata
AL5G27360 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13581062-13586061 Arabidopsis lyrata
AL5G27360 5.0kb downstream 5.0kb downstream 6206   true scaffold_5: 13574856-13581061 Arabidopsis lyrata
AL5G27360 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13574856-13579855 Arabidopsis lyrata
AL5G27360 10.0kb upstream 10.0kb upstream 11206   true scaffold_5: 13579856-13591061 Arabidopsis lyrata
AL5G27360 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13581062-13591061 Arabidopsis lyrata
AL5G27360 10.0kb downstream 10.0kb downstream 11206   true scaffold_5: 13569856-13581061 Arabidopsis lyrata
AL5G27360 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13569856-13579855 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361992 5261 Brassicaceae View MSA
123833689 5264 Brassicales-Malvales View MSA
124339417 5266 SBM View MSA
124239233 5268 Malvidae View MSA
124069964 5270 Rosid View MSA
123750302 5271 Pentapetalae View MSA
122790917 5272 Eudicot View MSA
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain