Gene : AL5G27540 A. lyrata v2.1
Defline:  (1 of 1) PTHR12326 - PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN Genomic Order:  1509
Name:  ? AL5G27540 Secondary Identifier:  ? PAC:35921297
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G27540 0.5kb upstream 0.5kb upstream 5823   true scaffold_5: 13681971-13687793 Arabidopsis lyrata
AL5G27540 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13687294-13687793 Arabidopsis lyrata
AL5G27540 0.5kb downstream 0.5kb downstream 5823   true scaffold_5: 13681471-13687293 Arabidopsis lyrata
AL5G27540 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13681471-13681970 Arabidopsis lyrata
AL5G27540 1.0kb upstream 1.0kb upstream 6323   true scaffold_5: 13681971-13688293 Arabidopsis lyrata
AL5G27540 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13687294-13688293 Arabidopsis lyrata
AL5G27540 1.0kb downstream 1.0kb downstream 6323   true scaffold_5: 13680971-13687293 Arabidopsis lyrata
AL5G27540 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13680971-13681970 Arabidopsis lyrata
AL5G27540 2.0kb upstream 2.0kb upstream 7323   true scaffold_5: 13681971-13689293 Arabidopsis lyrata
AL5G27540 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13687294-13689293 Arabidopsis lyrata
AL5G27540 2.0kb downstream 2.0kb downstream 7323   true scaffold_5: 13679971-13687293 Arabidopsis lyrata
AL5G27540 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13679971-13681970 Arabidopsis lyrata
AL5G27540 5.0kb upstream 5.0kb upstream 10323   true scaffold_5: 13681971-13692293 Arabidopsis lyrata
AL5G27540 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13687294-13692293 Arabidopsis lyrata
AL5G27540 5.0kb downstream 5.0kb downstream 10323   true scaffold_5: 13676971-13687293 Arabidopsis lyrata
AL5G27540 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13676971-13681970 Arabidopsis lyrata
AL5G27540 10.0kb upstream 10.0kb upstream 15323   true scaffold_5: 13681971-13697293 Arabidopsis lyrata
AL5G27540 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13687294-13697293 Arabidopsis lyrata
AL5G27540 10.0kb downstream 10.0kb downstream 15323   true scaffold_5: 13671971-13687293 Arabidopsis lyrata
AL5G27540 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13671971-13681970 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374711 5261 Brassicaceae View MSA
123828955 5264 Brassicales-Malvales View MSA
124345760 5266 SBM View MSA
124241710 5268 Malvidae View MSA
124060618 5270 Rosid View MSA
123737398 5271 Pentapetalae View MSA
122793571 5272 Eudicot View MSA
122042332 5273 Angiosperm View MSA
121350531 5274 Embryophyte View MSA
123381775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain