Gene : AL5G26790 A. lyrata v2.1

Defline:  (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Genomic Order:  1439
Name:  ? AL5G26790 Secondary Identifier:  ? PAC:35919931

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G26790 0.5kb upstream 0.5kb upstream 3252   true scaffold_5: 13280943-13284194 Arabidopsis lyrata
AL5G26790 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13280943-13281442 Arabidopsis lyrata
AL5G26790 0.5kb downstream 0.5kb downstream 3252   true scaffold_5: 13281443-13284694 Arabidopsis lyrata
AL5G26790 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13284195-13284694 Arabidopsis lyrata
AL5G26790 1.0kb upstream 1.0kb upstream 3752   true scaffold_5: 13280443-13284194 Arabidopsis lyrata
AL5G26790 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13280443-13281442 Arabidopsis lyrata
AL5G26790 1.0kb downstream 1.0kb downstream 3752   true scaffold_5: 13281443-13285194 Arabidopsis lyrata
AL5G26790 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13284195-13285194 Arabidopsis lyrata
AL5G26790 2.0kb upstream 2.0kb upstream 4752   true scaffold_5: 13279443-13284194 Arabidopsis lyrata
AL5G26790 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13279443-13281442 Arabidopsis lyrata
AL5G26790 2.0kb downstream 2.0kb downstream 4752   true scaffold_5: 13281443-13286194 Arabidopsis lyrata
AL5G26790 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13284195-13286194 Arabidopsis lyrata
AL5G26790 5.0kb upstream 5.0kb upstream 7752   true scaffold_5: 13276443-13284194 Arabidopsis lyrata
AL5G26790 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13276443-13281442 Arabidopsis lyrata
AL5G26790 5.0kb downstream 5.0kb downstream 7752   true scaffold_5: 13281443-13289194 Arabidopsis lyrata
AL5G26790 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13284195-13289194 Arabidopsis lyrata
AL5G26790 10.0kb upstream 10.0kb upstream 12752   true scaffold_5: 13271443-13284194 Arabidopsis lyrata
AL5G26790 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13271443-13281442 Arabidopsis lyrata
AL5G26790 10.0kb downstream 10.0kb downstream 12752   true scaffold_5: 13281443-13294194 Arabidopsis lyrata
AL5G26790 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13284195-13294194 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367185 5261 Brassicaceae View MSA
123839450 5264 Brassicales-Malvales View MSA
124340031 5266 SBM View MSA
124251215 5268 Malvidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain